WormBase Tree Display for Gene: WBGene00060887

WBGene00060887 SMap: S_parent: Sequence: Crem_Contig34
  Identity: Version: 3
    Name: CGC_name: Cre-unc-122 From_analysis: Inferred_from_orthology
      Sequence_name: CRE20743
      Molecular_name: CRE20743
        CRE20743.1
        RP19238
      Other_name: cr01.sctg20.wum.79
      Public_name: Cre-unc-122
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-unc-122
        3 03 Jul 2008 11:45:34 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE20743
                Other_name: cr01.sctg20.wum.79
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 0.200906 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0.309502 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.418098 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.608216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        3.3162 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        3.38062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        3.84293 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        4.30523 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        4.97075 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.205289 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        1.48017 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.11461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        2.1206 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.473059 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.679872 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.801817 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.18399 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.30521 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.56617 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.15404 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        2.15628 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (11)
      WBls:0000101 1.13253 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.46145 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (28)
    Paralog: WBGene00064309 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00067643 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Olfactomedin-like domain; Collagen triple helix repeat; and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans unc-122. In C. elegans, unc-122 is involved in negative regulation of cholinergic synaptic transmission. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE20743
    Corresponding_transcript: CRE20743.1
    Other_sequence (14)
  Experimental_info: Expr_pattern: Expr1116098
    Microarray_results: GPL14146_CRE20743_1222-1281_0.899_38_A
      GPL14146_CRE20743_540-599_0.839_86_C
      GPL14146_CRE20743_960-1019_0.881_54_B
  Method: Gene