WormBase Tree Display for Gene: WBGene00140494

WBGene00140494 SMap: S_parent: Sequence: Cbre_Contig174
  Identity: Version: 2
    Name: CGC_name: Cbn-unc-77 From_analysis: Inferred_from_orthology
      Sequence_name: CBN01769
      Molecular_name: CBN01769
        CBN01769.1
        CN28552
      Public_name: Cbn-unc-77
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-unc-77
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 0.1497 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0.275909 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.362568 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        0.363682 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.364796 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0.457138 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.457523 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.477897 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0.489467 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
      WBls:0000004 0.039732 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.079463 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0.302008 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0.422122 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0.984136 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        1.20703 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        1.27314 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 0.632232 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        0.785602 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        0.938972 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 0.030509 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        0.058409 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        0.077611 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        0.174326 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        0.178943 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        0.18356 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        0.25561 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        0.371602 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        0.446243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        0.461381 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        0.463905 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        0.490113 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        0.651348 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        0.680761 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
      WBls:0000101 0.18356 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        0.274178 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00203539
      00203540
      00203541
      00203542
    Ortholog: WBGene00006809 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00027947 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00066082 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00107390 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00122833 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135142 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      CBOVI.g8570 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g184 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g185 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14560 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21109 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10428 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7911 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g7912 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10214 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2263 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15963 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5565 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_06589.g20353 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-77 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17351 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_20372 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013653 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12811 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14329 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40161400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00073165 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074869 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00080174 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00084742 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00092845 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00222695 Brugia malayi From_analysis: WormBase-Compara
      chrIV_pilon.g10560 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245319 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00266153 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00153792 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00154155 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00147845 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00153171 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00163993 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00190957 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00191184 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-77. In C. elegans, unc-77 is involved in positive regulation of GABAergic synaptic transmission; positive regulation of cholinergic synaptic transmission; and positive regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN01769
    Corresponding_CDS_history: CBN01769:np198
    Corresponding_transcript: CBN01769.1
    Other_sequence: JO468378.1
      FG620967.1
      JI242386.1
      JI164103.1
      CR08460
      CRC03399_1
      EY469491.1
      AS09929
      JI172681.1
      JI229652.1
      ACC30963_1
      Oden_isotig22532
  Experimental_info: Microarray_results: GPL14142_CBN01769_5630-5689_0.943_1_A
      GPL14142_CBN15430_3280-3339_0.904_25_B
      GPL14142_CBN15430_3283-3342_0.916_13_A
      GPL14142_CBN15430_3287-3346_0.894_32_C
  Method: Gene