Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00132456

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00132456SMapS_parentSequenceCjap.Contig18209
IdentityVersion2
NameCGC_nameCjp-valv-1From_analysisInferred_from_orthology
Sequence_nameCJA13252
Molecular_nameCJA13252
CJA13252.1
JA17094
Public_nameCjp-valv-1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-valv-1
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvalv
RNASeq_FPKMWBls:000000473.0592From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000279.56608From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000383.65723From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
3.91829From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
4.17936From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004112.8581From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
15.0247From_analysisRNASeq.japonica.WBls:0000041.control_mean
15.609From_analysisRNASeq.japonica.WBls:0000041.control_median
18.3599From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
18.8858From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
21.077From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
22.2587From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
7.86899From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
9.33201From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
9.55706From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
WBls:000010116.2046From_analysisRNASeq.japonica.total_over_all_stages.control_mean
9.56608From_analysisRNASeq.japonica.total_over_all_stages.control_median
OrthologWBGene00015216Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00028234Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00068716Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00098449Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00194386Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00271725Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00222094Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g11146Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16207Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13623Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10793Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7502Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5331Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16350Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3952Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19419Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_IV.g13801Caenorhabditis nigoniFrom_analysisWormBase-Compara
FL83_18766Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013932Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g106Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40298100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10831Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242419Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00287575Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00120288Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123782Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125552Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127225Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128518Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130195Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132017Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137173Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00206731Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00215878Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, LIM-type and LIM domain. Is an ortholog of C. elegans valv-1. In C. elegans, valv-1 is involved in digestive system process and egg-laying behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA13252
Corresponding_transcriptCJA13252.1
Other_sequenceDN191297.1
Tcir_isotig12273
AS01888
PPC09258
BF400483.1
BMC01510_1
HCC02390_1
Oden_isotig23303
Dviv_isotig11149
AE01911
Tcir_isotig10136
TS03816
AS15456
ASC17452_1
MH03587
Oden_isotig24576
EV850322.1
Acan_isotig15934
Tcol_isotig09254
PT01685
ES410464.1
FE917122.1
MHC11626_1
AA917132.1
AI574555.1
JI224073.1
FE917683.1
DN190564.1
ES565443.1
AAC00170_1
AI511506.1
PTC00678_1
HC00915
HC04008
Hbac_isotig06560
JI476271.1
Dviv_isotig11150
Acan_isotig00429
JI216146.1
EX911521.1
JK315593.1
JK315157.1
MHC10021_1
MIC00626_2
TCC00500_1
DVC00937_1
MH07016
ASC02691_1
Dviv_isotig11148
BXC04765_1
JK315505.1
MP00614
OVC00802_1
GO249717.1
FE909786.1
BM517225.1
MHC05571_1
ASC17445_1
BE239247.1
JI182474.1
GO249663.1
TSC14558_1
MH00078
AI308650.1
ES739198.1
AI130597.1
AI317910.1
AS02187
AYC00637_1
ES880293.1
TX00389
HC01415
AE03528
Dviv_isotig18264
EX010535.1
MH05287
MPC00248_1
CBC04280_1
ES413485.1
PTC03941_1
EV850400.1
TCC00542_1
HCC02390_2
EX912609.1
AS02387
Tcol_isotig09255
Dviv_isotig11147
Dviv_isotig11146
MI00054
TSC02860_1
TX02095
ES880294.1
HBC01856_1
PT01813
MAC01393_1
DA05343
AS01845
EX009870.1
MH02616
ES744076.1
Experimental_infoExpr_patternExpr1070347
Microarray_resultsGPL14145_CJA13252_197-256_0.662_16_A
GPL14145_CJA13252_44-103_0.918_2_C
GPL14145_CJA13252_84-143_0.949_1_B
MethodGene