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WormBase Tree Display for Gene: WBGene00242419

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Name Class

WBGene00242419SMapS_parentSequenceOVOC_OM2_79
IdentityVersion2
NameCGC_nameOvo-exc-9From_analysisInferred_from_orthology
Sequence_nameOVOC5610
Molecular_nameOVOC5610
OVOC5610.1
OVP14196
Public_nameOvo-exc-9
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-exc-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classexc
RNASeq_FPKMWBls:00001013.52568From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
5.94091From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:000010719.0522From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.39121From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
2.42992From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
3.39787From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
5.37248From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066411.5179From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
15.3805From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
19.2431From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (54)
ParalogWBGene00236824Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237286Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238146Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238705Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239469Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239561Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239708Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239946Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240820Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, LIM-type and LIM domain. Is an ortholog of C. elegans exc-9 and valv-1. In C. elegans, valv-1 is involved in digestive system process and egg-laying behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC5610
Corresponding_CDS_historyOVOC5610:ov244
Corresponding_transcriptOVOC5610.1
Other_sequence (140)
Experimental_infoExpression_clusterWBPaper00050764:Ov-L4_enriched
MethodGene