WormBase Tree Display for Gene: WBGene00239561

WBGene00239561 SMap: S_parent: Sequence: OVOC_OM1b_119
  Identity: Version: 2
    Name: CGC_name: Ovo-mec-3 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC2752
      Molecular_name: OVOC2752
        OVOC2752.1
        OVP04717
      Public_name: Ovo-mec-3
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:33 WBPerson4055 Name_change: CGC_name: Ovo-mec-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mec
    RNASeq_FPKM: WBls:0000101 0.033266 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        0.893943 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 0.033704 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
        0.123659 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        0.219604 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
        0.286459 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
        0.431864 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
        0.666654 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_mean
        0 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
        3.73645 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        5.16807 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
      WBls:0000107 1.82842 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 1.74514 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        2.24796 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        2.6019 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        3.81259 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 0.016414 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        0.032828 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        0 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    GO_annotation: 00253501
    Ortholog (20)
    Paralog: WBGene00236824 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00237286 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238146 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238705 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239469 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239708 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239946 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240820 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242419 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans mec-3. In C. elegans, mec-3 is involved in several processes, including mechanosensory behavior; neuron projection organization; and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC2752
    Corresponding_transcript: OVOC2752.1
    Other_sequence: JI224573.1
      Tcol_isotig18359
      ACC18695_1
      EY459924.1
      Oden_isotig22305
      Dviv_isotig17580
      Acan_isotig04038
      Dviv_isotig17581
      Tcir_isotig12826
      Acan_isotig04039
  Method: Gene