WormBase Tree Display for Gene: WBGene00239469

WBGene00239469 SMap: S_parent: Sequence: OVOC_OM1b_117
  Identity: Version: 2
    Name: CGC_name: Ovo-lim-6 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC2660
      Molecular_name: OVOC2660
        OVOC2660.1
        OVP00663
      Public_name: Ovo-lim-6
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-lim-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lim
    RNASeq_FPKM: WBls:0000101 0.510336 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
      WBls:0000104 0.132399 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_mean
        0.246901 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
        0.405321 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        0.602516 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        0.731244 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
        0 From_analysis (12)
      WBls:0000107 2.28103 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 1.62132 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        2.32012 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        2.66319 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        2.67586 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
      WBls:0000664 0 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    GO_annotation: 00253430
    Ortholog (27)
    Paralog: WBGene00236824 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00237286 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238146 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238705 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239561 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239708 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239946 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240820 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242419 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans lim-6. In C. elegans, lim-6 is involved in several processes, including regulation of gene expression; system process; and uterus morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC2660
    Corresponding_transcript: OVOC2660.1
    Other_sequence: Dviv_isotig12251
      HBC02257_1
      Acan_isotig17193
      ES408593.1
      SS02867
      SSC02344_1
      Dviv_isotig26261
      TS05827
      JI212657.1
  Method: Gene