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WormBase Tree Display for Gene: WBGene00068716

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Name Class

WBGene00068716SMapS_parentSequenceCrem_Contig20
IdentityVersion3
NameCGC_nameCre-valv-1From_analysisInferred_from_orthology
Sequence_nameCRE12506
Molecular_nameCRE12506
CRE12506.1
RP06724
Other_namecr01.sctg124.wum.39
Public_nameCre-valv-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
203 Jul 2008 11:46:22WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE12506
Other_namecr01.sctg124.wum.39
304 Jul 2008 11:06:45WBPerson4055Name_changeCGC_nameCre-valv-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvalv
RNASeq_FPKMWBls:00000040From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
RNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (52)
WBls:000002711.1064From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
13.8966From_analysisRNASeq.remanei.WBls:0000027.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
44.4799From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.5532From_analysisRNASeq.remanei.WBls:0000027.control_median
WBls:000003815.147From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
15.3672From_analysisRNASeq.remanei.WBls:0000038.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
30.9546From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004124.4562From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
26.3325From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
29.2687From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
36.4776From_analysisRNASeq.remanei.WBls:0000041.control_median
37.553From_analysisRNASeq.remanei.WBls:0000041.control_mean
43.6864From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
48.4165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
53.1576From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:000006310.9493From_analysisRNASeq.remanei.WBls:0000063.control_median
12.4308From_analysisRNASeq.remanei.WBls:0000063.control_mean
15.779From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
16.0809From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
16.738From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
21.4664From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
48.1245From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
6.11962From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
WBls:000010115.463From_analysisRNASeq.remanei.total_over_all_stages.control_median
17.3582From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (24)
Paralog (13)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, LIM-type and LIM domain. Is an ortholog of C. elegans valv-1. In C. elegans, valv-1 is involved in digestive system process and egg-laying behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE12506
Corresponding_transcriptCRE12506.1
Other_sequence (45)
Experimental_infoExpr_patternExpr1100722
Microarray_resultsGPL14146_CRE12506_191-250_0.958_1_A
MethodGene