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WormBase Tree Display for Gene: WBGene00119812

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Name Class

WBGene00119812SMapS_parentSequenceCjap.Contig17880
IdentityVersion2
NameCGC_nameCjp-unc-6From_analysisInferred_from_orthology
Sequence_nameCJA00610
Molecular_nameCJA00610
CJA00610.1
JA52586
Public_nameCjp-unc-6
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-unc-6
229 Jul 2011 11:13:36WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000444.4559From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002710.6898From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003810.4912From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
11.1759From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
11.8606From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.889253From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.45481From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.17316From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
2.26259From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
2.53018From_analysisRNASeq.japonica.WBls:0000041.control_median
2.69832From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.79778From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
3.47697From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
4.19982From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
4.33217From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
WBls:00001013.47697From_analysisRNASeq.japonica.total_over_all_stages.control_median
7.62185From_analysisRNASeq.japonica.total_over_all_stages.control_mean
OrthologWBGene00006746Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00032168Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00051410Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00113122Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00148673Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00224249Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3278Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10853Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21093Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15050Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2767Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20643Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9212Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10840Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g375Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10862Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00160.g5922Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05761.g19817Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold570.g4243Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00707.g14621Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00273Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024674Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01017Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4021Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0196500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19321Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242009Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266163Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297119Trichuris murisFrom_analysisWormBase-Compara
WBGene00300156Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00126999Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00211653Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00119311Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120303Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125021Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125894Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128411Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135243Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135871Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136945Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137812Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210123Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216705Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Laminin, N-terminal; UNC-6/NTR/C345C module; Laminin-type EGF domain; Tissue inhibitor of metalloproteinases-like, OB-fold; Netrin module, non-TIMP type; Laminin EGF domain; and Laminin N-terminal (Domain VI). Is an ortholog of C. elegans unc-6. In C. elegans, unc-6 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA00610
Corresponding_transcriptCJA00610.1
Other_sequenceSRC02207_1
AIC00174_1
Dviv_isotig24727
BE217664.1
EY466445.1
FC810088.1
ACC17601_1
MIC02438_1
JI460417.1
MI02920
EH005480.1
FC553194.1
EY460685.1
Acan_isotig10408
CR06517
FC550368.1
BXC06240_1
CRC08904_1
SR01905
CRC02888_1
FC815460.1
EY466714.1
JI170154.1
Experimental_infoExpr_patternExpr1083079
Microarray_resultsGPL14145_CJA00610_836-895_0.862_28_B
GPL14145_CJA00610_908-967_0.806_74_A
GPL14145_CJA00610_931-990_0.865_24_C
MethodGene