WormBase Tree Display for Gene: WBGene00044162
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| WBGene00044162 | SMap | S_parent | Sequence | F49C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F49C5.10 | |||||||
| Molecular_name | F49C5.10 | ||||||||
| F49C5.10.1 | |||||||||
| CE53905 | |||||||||
| Other_name | CELE_F49C5.10 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F49C5.10 | ||||||||
| DB_info | Database | AceView | gene | F49C5.10 | |||||
| WormFlux | gene | WBGene00044162 | |||||||
| NDB | locus_tag | CELE_F49C5.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044162|UniProtKB=Q564T9 | |||||||
| family | PTHR36517 | ||||||||
| NCBI | gene | 3565641 | |||||||
| RefSeq | protein | NM_001377881.1 | |||||||
| TREEFAM | TREEFAM_ID | TF342747 | |||||||
| TrEMBL | UniProtAcc | Q564T9 | |||||||
| UniProt_GCRP | UniProtAcc | Q564T9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Mar 2005 17:58:55 | WBPerson1983 | Event | Created | |||
| 2 | 21 Nov 2019 15:14:14 | WBPerson4025 | Event | Split_into | WBGene00305130 | ||||
| Split_into | WBGene00305130 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00028675 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00053058 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00144756 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00163530 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| chrII_pilon.g6204 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00008826 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00009360 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011921 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00015854 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00016770 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018822 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00044538 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00077624 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00044163 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00305130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; ABprpppaaa; RIB; g2; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including sir-2.1; aak-2; and unc-30 based on tiling array; RNA-seq; and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF281) and Domain of unknown function DUF281. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49C5.10 | |||||||
| Corresponding_CDS_history | F49C5.10:wp274 | ||||||||
| Corresponding_transcript | F49C5.10.1 | ||||||||
| Associated_feature | WBsf657181 | ||||||||
| WBsf990136 | |||||||||
| WBsf1013457 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015296 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047818 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020583 | ||||||||
| Expr1151646 | |||||||||
| Expr2003920 | |||||||||
| Expr2022142 | |||||||||
| Drives_construct | WBCnstr00023721 | ||||||||
| Construct_product | WBCnstr00023721 | ||||||||
| Microarray_results | SMD_F49C5.5 | ||||||||
| GPL8304_CE_WBGene00044162_A | |||||||||
| GPL8673_F49C5_10P00047 | |||||||||
| GPL8673_F49C5_10P00287 | |||||||||
| Expression_cluster (19) | |||||||||
| Map_info | Positive | Positive_clone | F49C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 10.3073 | |||||||
| Method | Gene |
