WormBase Tree Display for Gene: WBGene00015854
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| WBGene00015854 | SMap | S_parent | Sequence | C16C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | C16C8.17 | |||||||
| Molecular_name | C16C8.17 | ||||||||
| C16C8.17.1 | |||||||||
| CE53891 | |||||||||
| Other_name | CELE_C16C8.17 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C16C8.17 | ||||||||
| DB_info | Database | AceView | gene | 2D733 | |||||
| WormQTL | gene | WBGene00015854 | |||||||
| WormFlux | gene | WBGene00015854 | |||||||
| NDB | locus_tag | CELE_C16C8.17 | |||||||
| NCBI | gene | 43578468 | |||||||
| RefSeq | protein | NM_001377758.1 | |||||||
| TREEFAM | TREEFAM_ID | TF342747 | |||||||
| TrEMBL | UniProtAcc | P91058 | |||||||
| UniProt_GCRP | UniProtAcc | P91058 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Oct 2019 15:06:23 | WBPerson4025 | Event | Split_into | WBGene00305093 | ||||
| Split_into | WBGene00305093 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00053058 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| chrII_pilon.g3979 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00008826 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00009360 | |||||||||
| WBGene00011921 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018822 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00044538 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00044162 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00016770 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00077624 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00305093 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in ABaraapapp; ABaraapppp; germ line; male-specific anatomical entity; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; sir-2.1; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including allantoin; Psoralens; and metformin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16C8.17 | |||||||
| Corresponding_CDS_history | C16C8.17:wp274 | ||||||||
| Corresponding_transcript | C16C8.17.1 | ||||||||
| Associated_feature | WBsf987256 | ||||||||
| WBsf1011901 | |||||||||
| WBsf1011902 | |||||||||
| WBsf221011 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112575 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1010799 | ||||||||
| Expr1144758 | |||||||||
| Expr2000865 | |||||||||
| Expr2019082 | |||||||||
| Drives_construct | WBCnstr00028513 | ||||||||
| Construct_product | WBCnstr00028513 | ||||||||
| Microarray_results | SMD_C16C8.17 | ||||||||
| SMD_C16C8.17:2 | |||||||||
| GPL19516_CGZ0004923 | |||||||||
| GPL21109_C16C8.17 | |||||||||
| GPL8673_C16C8_17P00086 | |||||||||
| Expression_cluster (52) | |||||||||
| Interaction | WBInteraction000151223 | ||||||||
| WBInteraction000301634 | |||||||||
| WBInteraction000399653 | |||||||||
| WBInteraction000429753 | |||||||||
| WBInteraction000434795 | |||||||||
| Map_info | Positive | Positive_clone | C16C8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -6.30323 | |||||||
| Method | Gene |
