WormBase Tree Display for Gene: WBGene00008826

WBGene00008826 SMap: S_parent: Sequence: F14H3
  Identity: Version: 3
    Name: CGC_name: fbxa-100 Person_evidence: WBPerson655
      Sequence_name: F14H3.7
      Molecular_name: F14H3.7
        F14H3.7.1
        CE47668
      Other_name: CELE_F14H3.7 Accession_evidence: NDB BX284605
      Public_name: fbxa-100
    DB_info: Database: AceView gene 5Q540
        WormQTL gene WBGene00008826
        WormFlux gene WBGene00008826
        NDB locus_tag CELE_F14H3.7
        Panther gene CAEEL|WormBase=WBGene00008826|UniProtKB=Q9XU99
          family PTHR23015
        NCBI gene 184492
        RefSeq protein NM_074640.2
        TREEFAM TREEFAM_ID TF342747
        TrEMBL UniProtAcc Q9XU99
        UniProt_GCRP UniProtAcc Q9XU99
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-100
        3 02 Apr 2012 12:47:56 WBPerson4025 Event: Split_into: WBGene00219414
      Split_into: WBGene00219414
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (52)
    RNASeq_FPKM (74)
    Ortholog (11)
    Paralog (227)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in germ line; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including elt-2; npr-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by methylmercuric chloride; resveratrol; and Sirolimus based on microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F14H3.7
    Corresponding_CDS_history: F14H3.7:wp231
    Corresponding_transcript: F14H3.7.1
  Experimental_info: RNAi_result: WBRNAi00013325 Inferred_automatically: RNAi_primary
      WBRNAi00044658 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012776
      Expr1148632
      Expr2011448
      Expr2029686
    Microarray_results: SMD_F14H3.7
      178329_at
      Aff_F14H3.7
      GPL19516_CGZ0016377
      GPL21109_F14H3.7
      GPL3518_CE19794
      GPL8304_CE_WBGene00008826_A
      GPL8673_F14H3_7P00066
    Expression_cluster (36)
    Interaction: WBInteraction000170558
      WBInteraction000255855
      WBInteraction000283161
      WBInteraction000285031
      WBInteraction000356114
      WBInteraction000373998
      WBInteraction000385523
      WBInteraction000390022
      WBInteraction000449781
  Map_info: Map: V Position: 9.42917 Error: 0.005542
    Positive: Positive_clone: F14H3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene