WormBase Tree Display for Gene: WBGene00029609

WBGene00029609 SMap: S_parent: Sequence: cb25.fpc0829
  Identity: Version: 5
    Name: CGC_name: Cbr-unc-7 From_analysis: Inferred_from_orthology
      Sequence_name: CBG07625
      Molecular_name: CBG07625a
        CBG07625a.1
        CBP01862
        CBG07625b
        CBP42341
        CBG07625c
        CBP47963
        CBG07625d
        CBP48147
        CBG07625e
        CBP48088
        CBG07625b.1
        CBG07625c.1
        CBG07625d.1
        CBG07625e.1
      Other_name: CBG_07625 Accession_evidence: NDB HE601041
        CBG_07622
      Public_name: Cbr-unc-7
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:59 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-unc-7
        3 03 Mar 2017 00:18:26 WBPerson4025 Event: Acquires_merge: WBGene00029608
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Cbr-unc-7
        6 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cbr-unc-7
      Acquires_merge: WBGene00029608
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    Allele: WBVar00008382
      WBVar00112639
      WBVar00112633
      WBVar00112640
      WBVar00112634
      WBVar00008387
      WBVar00112635
      WBVar00112641
      WBVar00112642
      WBVar00112636
      WBVar00008392
      WBVar00112637
      WBVar00008377
      WBVar00136724
      WBVar00112638
      WBVar00112632
    RNASeq_FPKM: WBls:0000002 10.6913 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        14.045 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        15.2762 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        16.1675 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        12.0124 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        12.9838 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.91449 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.415045 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        2.34949 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        4.28393 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        2.42623 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        2.57971 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 12.2535 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        13.5927 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        14.9319 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        10.2254 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        12.0636 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        12.674 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        13.8954 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 15.2458 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        16.8322 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        22.6261 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        24.3288 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        33.929 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        34.2994 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        35.0354 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        35.7715 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        41.3161 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        19.5584 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        20.9622 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        22.1716 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 12.8116 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.70363 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        29.0875 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        6.64354 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        17.8655 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        18.3041 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        34.7817 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 25.5711 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.1472 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        12.8161 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        13.0757 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        14.0041 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        21.6612 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        3.45207 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.927211 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.32635 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.39102 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.45568 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        2.78497 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        7.43062 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        3.31155 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.66902 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.16742 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        5.70685 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 1.72091 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.85219 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.98191 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.03283 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        2.7376 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.00737 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        2.00987 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3.4547 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 11.8879 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        7.43062 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        11.5405 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        7.03708 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    Contained_in_operon: CBOPA0721
    Ortholog: WBGene00140998 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g11896 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13029 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3276 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13311 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23154 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24936 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9712 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5431 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9019 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8811 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00338.g9432 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold466.g1610 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00643.g13939 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01746 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025582 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00710 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8708 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0137200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00006747 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00225532 Brugia malayi From_analysis: WormBase-Compara
      chrX_pilon.g20708 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00132921 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00058608 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00242542 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00108249 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00267202 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286065 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00026622 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026740 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027751 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028427 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030376 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031036 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032178 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032949 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032982 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032983 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033012 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033013 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033060 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033061 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033062 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033105 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035187 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035203 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037022 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038485 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040109 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040904 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041233 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041852 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Innexin. Is an ortholog of C. elegans unc-7. In C. elegans, unc-7 is involved in several processes, including regulation of multicellular organismal process; reproductive behavior; and response to anesthetic. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG07625a
      CBG07625b
      CBG07625c
      CBG07625d
      CBG07625e
    Corresponding_CDS_history: CBG07625:bp194
    Corresponding_transcript: CBG07625a.1
      CBG07625b.1
      CBG07625c.1
      CBG07625d.1
      CBG07625e.1
    Other_sequence: SS02696
      AE03531
      CK850119.1
      Dviv_isotig12582
      EL889856.1
      MA02061
      EY462678.1
      JO469537.1
      EY465855.1
      WBC01643_1
      ACC22925_1
      FC551761.1
      Dviv_isotig12581
      BXC00287_1
      MAC01392_1
      EY469356.1
      JI223415.1
      MHC01260_1
      Acan_isotig10924
      EX827972.1
      JI164359.1
      EY458719.1
      Oden_isotig19280
      EY467607.1
      GP00967
      ES880546.1
      MAC00182_1
      GR11998
      EX501438.1
      EY465995.1
      GRC00677_1
      SSC04550_1
      MA00742
      Acan_isotig10076
      TSC07333_1
      JI166346.1
      FE909069.1
      ASC38755_1
      ACC37046_1
      ACC00836_1
      MH00634
      Name_isotig03446
      GO249309.1
      ACC05922_1
      Dviv_isotig12580
      MH08342
      EY469239.1
      EY467618.1
      BXC06353_1
  Experimental_info: Expr_pattern: Expr1059718
      Expr1066439
    Microarray_results: GPL8303_CB6_WBGene00029609_A
      GPL8303_CB6_WBGene00029609_B
      GPL14143_CBG07622_81-140_0.918_1_A
      GPL14143_CBG07625_975-1034_0.786_12_A
      GPL14143_CBG07625_1221-1280_0.787_11_B
      GPL14143_CBG07625_1384-1443_0.832_1_C
  Remark: [190208 pad] The CGC name Cbr-unc-7 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbr-unc-7 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene