WormBase Tree Display for Gene: WBGene00018991
expand all nodes | collapse all nodes | view schema
| WBGene00018991 | SMap | S_parent | Sequence | F56F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F56F11.4 | |||||||
| Molecular_name | F56F11.4a | ||||||||
| F56F11.4a.1 | |||||||||
| CE28467 | |||||||||
| F56F11.4b | |||||||||
| CE31008 | |||||||||
| F56F11.4a.2 | |||||||||
| F56F11.4b.1 | |||||||||
| Other_name | CELE_F56F11.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F56F11.4 | ||||||||
| DB_info | Database | AceView | gene | 3D953 | |||||
| WormQTL | gene | WBGene00018991 | |||||||
| WormFlux | gene | WBGene00018991 | |||||||
| NDB | locus_tag | CELE_F56F11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018991|UniProtKB=Q8MXF1 | |||||||
| family | PTHR23073 | ||||||||
| NCBI | gene | 175403 | |||||||
| RefSeq | protein | NM_001393300.1 | |||||||
| NM_001381790.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF352211 | |||||||
| TrEMBL | UniProtAcc | Q8MXF1 | |||||||
| Q9TZ65 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MXF1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (251) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00084565 | ||||||||
| 00084566 | |||||||||
| 00084567 | |||||||||
| 00084568 | |||||||||
| 00084569 | |||||||||
| 00084570 | |||||||||
| 00084571 | |||||||||
| 00123944 | |||||||||
| 00123945 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00004501 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00004502 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004503 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004504 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004505 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004506 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015688 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable proteasome-activating activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of proteasome regulatory particle, base subcomplex. Is an ortholog of human PSMC5 (proteasome 26S subunit, ATPase 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56F11.4a | |||||||
| F56F11.4b | |||||||||
| Corresponding_transcript | F56F11.4a.1 | ||||||||
| F56F11.4a.2 | |||||||||
| F56F11.4b.1 | |||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf645004 | ||||||||
| WBsf991613 | |||||||||
| WBsf991614 | |||||||||
| WBsf1014468 | |||||||||
| WBsf1014469 | |||||||||
| WBsf1014470 | |||||||||
| WBsf1014471 | |||||||||
| WBsf1014472 | |||||||||
| WBsf224565 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1022017 | ||||||||
| Expr1038197 | |||||||||
| Expr1152492 | |||||||||
| Expr2004308 | |||||||||
| Expr2022532 | |||||||||
| Drives_construct | WBCnstr00026142 | ||||||||
| Construct_product | WBCnstr00026142 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (132) | |||||||||
| Map_info | Positive | Positive_clone | F56F11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -9.40247 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00044464 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
