WormBase Tree Display for Gene: WBGene00004501

WBGene00004501 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C52E4
  Identity: Version: 1
    Name: CGC_name: rpt-1 Person_evidence: WBPerson1551
      Sequence_name: C52E4.4
      Molecular_name: C52E4.4
        C52E4.4.1
        CE08946
      Other_name: CELE_C52E4.4 Accession_evidence: NDB BX284605
      Public_name: rpt-1
    DB_info: Database: AceView gene 5M462
        WormQTL gene WBGene00004501
        WormFlux gene WBGene00004501
        NDB locus_tag CELE_C52E4.4
        Panther gene CAEEL|WormBase=WBGene00004501|UniProtKB=Q18787
          family PTHR23073
        NCBI gene 179641
        RefSeq protein NM_073604.8
        SwissProt UniProtAcc Q18787
        TREEFAM TREEFAM_ID TF105661
        UniProt_GCRP UniProtAcc Q18787
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpt
    Allele (32)
    RNASeq_FPKM (74)
    GO_annotation (19)
    Ortholog (39)
    Paralog: WBGene00004503 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004504 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015688 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004502 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004506 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018991 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004505 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: rpt-1 encodes a predicted ATPase subunit of the 19S regulatory complex of the proteasome that affects fertility and embryonic viability. Paper_evidence: WBPaper00004888
            WBPaper00005599
            WBPaper00005654
            WBPaper00006395
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable proteasome-activating activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of proteasome regulatory particle, base subcomplex. Is an ortholog of human PSMC2 (proteasome 26S subunit, ATPase 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C52E4.4
    Corresponding_transcript: C52E4.4.1
    Other_sequence (113)
    Associated_feature: WBsf653172
      WBsf669438
      WBsf234601
      WBsf234602
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr1015931
      Expr1032303
      Expr1147010
      Expr2015534
      Expr2033769
    Drives_construct: WBCnstr00035441
    Construct_product: WBCnstr00035441
    Microarray_results (23)
    Expression_cluster (175)
    Interaction (276)
  Map_info: Map: V Position: 3.56252 Error: 0.002718
    Positive: Positive_clone: C52E4 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (12)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene