WormBase Tree Display for Gene: WBGene00017179
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WBGene00017179 | SMap | S_parent | Sequence | F02E11 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | wht | ||||||
Allele (90) | |||||||
Strain | WBStrain00031764 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Ortholog (41) | |||||||
Paralog | WBGene00006522 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00007060 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00007513 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00007631 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00008950 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00012925 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00015479 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00016973 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00021535 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including gout; hematologic cancer (multiple); and toxic encephalopathy. Is an ortholog of human ABCG1 (ATP binding cassette subfamily G member 1); ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group)); and ABCG4 (ATP binding cassette subfamily G member 4). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:8552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||
DOID:3602 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:3459 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:707 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:9952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:8761 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:13189 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:9538 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:9119 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
Molecular_info | Corresponding_CDS | F02E11.1 | |||||
Corresponding_CDS_history | F02E11.1:wp124 | ||||||
F02E11.1:wp244 | |||||||
Corresponding_transcript | F02E11.1.1 | ||||||
Other_sequence | Oden_isotig26129 | ||||||
JO470208.1 | |||||||
CRC10854_1 | |||||||
CBC00521_1 | |||||||
Dviv_isotig23481 | |||||||
JI169210.1 | |||||||
Associated_feature | WBsf987193 | ||||||
WBsf987194 | |||||||
WBsf987195 | |||||||
WBsf987196 | |||||||
WBsf987197 | |||||||
WBsf1011866 | |||||||
WBsf1011867 | |||||||
WBsf1011868 | |||||||
Experimental_info | RNAi_result | WBRNAi00012779 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043813 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017576 | ||||||
Expr1037387 | |||||||
Expr1147788 | |||||||
Expr2018065 | |||||||
Expr2036202 | |||||||
Drives_construct | WBCnstr00027504 | ||||||
Construct_product | WBCnstr00027504 | ||||||
Microarray_results (24) | |||||||
Expression_cluster (145) | |||||||
Interaction | WBInteraction000114189 | ||||||
WBInteraction000114200 | |||||||
WBInteraction000114202 | |||||||
WBInteraction000114203 | |||||||
WBInteraction000123701 | |||||||
WBInteraction000214741 | |||||||
WBInteraction000447271 | |||||||
WBInteraction000448176 | |||||||
WBInteraction000453756 | |||||||
Map_info | Map | II | Position | -7.0337 | Error | 0.033445 | |
Positive | Positive_clone | F02E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027644 | ||||||
WBPaper00031484 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |