WormBase Tree Display for Gene: WBGene00015424
expand all nodes | collapse all nodes | view schema
WBGene00015424 | SMap | S_parent | Sequence | H32I14 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C04E6.8 | |||||||
Molecular_name | C04E6.8 | ||||||||
C04E6.8.1 | |||||||||
CE45283 | |||||||||
Other_name | CELE_C04E6.8 | Accession_evidence | NDB | BX284605 | |||||
Public_name | C04E6.8 | ||||||||
DB_info | Database | AceView | gene | 5G360 | |||||
WormQTL | gene | WBGene00015424 | |||||||
WormFlux | gene | WBGene00015424 | |||||||
NDB | locus_tag | CELE_C04E6.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015424|UniProtKB=G4RVA5 | |||||||
family | PTHR31664 | ||||||||
NCBI | gene | 182203 | |||||||
RefSeq | protein | NM_072132.6 | |||||||
TREEFAM | TREEFAM_ID | TF317875 | |||||||
TrEMBL | UniProtAcc | G4RVA5 | |||||||
UniProt_GCRP | UniProtAcc | G4RVA5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (27) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (28) | |||||||||
Paralog | WBGene00009535 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WBGene00010413 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WBGene00011374 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WBGene00013647 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WBGene00016535 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00019818 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WBGene00044514 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WBGene00017297 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | C04E6.8 encodes a novel protein with similarity, in its N-terminus, to proteins from C. briggsae and C. remanei. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 11 Apr 2008 00:00:00 | ||||||||
Automated_description | Enriched in ADF; ADFL; ADFR; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; sir-2.1; and clk-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Tunicamycin; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4440); NTF2-like domain superfamily; and Domain of unknown function DUF4440. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C04E6.8 | |||||||
Corresponding_CDS_history | C04E6.8:wp172 | ||||||||
C04E6.8:wp217 | |||||||||
Corresponding_transcript | C04E6.8.1 | ||||||||
Associated_feature | WBsf668977 | ||||||||
WBsf233741 | |||||||||
Experimental_info | RNAi_result | WBRNAi00039613 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028431 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010125 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019059 | ||||||||
Expr1143713 | |||||||||
Expr2000403 | |||||||||
Expr2018628 | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (74) | |||||||||
Interaction (28) | |||||||||
Map_info | Positive | Positive_clone | C04E6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -0.791021 | |||||||
Method | Gene |