WormBase Tree Display for Gene: WBGene00016535
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| WBGene00016535 | SMap | S_parent | Sequence | C39D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C39D10.8 | |||||||
| Molecular_name | C39D10.8a | ||||||||
| C39D10.8a.1 | |||||||||
| CE29713 | |||||||||
| C39D10.8b | |||||||||
| CE29714 | |||||||||
| C39D10.8c | |||||||||
| CE30501 | |||||||||
| C39D10.8b.1 | |||||||||
| C39D10.8c.1 | |||||||||
| Other_name | CELE_C39D10.8 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C39D10.8 | ||||||||
| DB_info | Database | AceView | gene | XI498 | |||||
| WormQTL | gene | WBGene00016535 | |||||||
| WormFlux | gene | WBGene00016535 | |||||||
| NDB | locus_tag | CELE_C39D10.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016535|UniProtKB=Q95QR7 | |||||||
| family | PTHR31664 | ||||||||
| NCBI | gene | 181046 | |||||||
| RefSeq | protein | NM_171963.5 | |||||||
| NM_001381032.1 | |||||||||
| NM_171964.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF317875 | |||||||
| TrEMBL | UniProtAcc | H2KYM1 | |||||||
| Q95QR7 | |||||||||
| H2KYM0 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95QR7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00009535 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010413 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011374 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013647 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015424 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00019818 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044514 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017297 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including Caaaaa; Caaaap; Caaapa; Caaapp; and sensory neurons based on microarray; tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including Ethanol; manganese chloride; and D-glucose based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domain: NTF2-like domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39D10.8a | |||||||
| C39D10.8b | |||||||||
| C39D10.8c | |||||||||
| Corresponding_transcript | C39D10.8a.1 | ||||||||
| C39D10.8b.1 | |||||||||
| C39D10.8c.1 | |||||||||
| Other_sequence | CSC01704_1 | ||||||||
| CBC03421_1 | |||||||||
| FD514820.1 | |||||||||
| Associated_feature | WBsf654171 | ||||||||
| WBsf1005983 | |||||||||
| WBsf1005984 | |||||||||
| WBsf1005985 | |||||||||
| WBsf1005986 | |||||||||
| WBsf1023327 | |||||||||
| WBsf1023328 | |||||||||
| WBsf1023329 | |||||||||
| WBsf237621 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042208 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011776 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021358 | ||||||||
| Expr1146200 | |||||||||
| Expr2001537 | |||||||||
| Expr2019758 | |||||||||
| Drives_construct | WBCnstr00027992 | ||||||||
| Construct_product | WBCnstr00027992 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (173) | |||||||||
| Interaction | WBInteraction000550295 | ||||||||
| WBInteraction000551899 | |||||||||
| WBInteraction000566063 | |||||||||
| WBInteraction000571890 | |||||||||
| WBInteraction000574823 | |||||||||
| WBInteraction000576169 | |||||||||
| WBInteraction000578742 | |||||||||
| WBInteraction000583736 | |||||||||
| WBInteraction000584109 | |||||||||
| Map_info | Positive | Positive_clone | C39D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -1.04065 | |||||||
| Method | Gene |
