WormBase Tree Display for Gene: WBGene00013647
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| WBGene00013647 | SMap | S_parent | Sequence | Y105C5B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y105C5B.5 | |||||||
| Molecular_name | Y105C5B.5a | ||||||||
| Y105C5B.5a.1 | |||||||||
| CE24081 | |||||||||
| Y105C5B.5b | |||||||||
| Other_name | CELE_Y105C5B.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y105C5B.5 | ||||||||
| DB_info | Database | AceView | gene | 4Q658 | |||||
| WormQTL | gene | WBGene00013647 | |||||||
| WormFlux | gene | WBGene00013647 | |||||||
| NDB | locus_tag | CELE_Y105C5B.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013647|UniProtKB=Q9U315 | |||||||
| family | PTHR31664 | ||||||||
| NCBI | gene | 190888 | |||||||
| RefSeq | protein | NR_131663.1 | |||||||
| NM_070493.9 | |||||||||
| TrEMBL | UniProtAcc | Q9U315 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U315 | |||||||
| RNAcentral | URSid | URS00007AD946 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00009535 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010413 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011374 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016535 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019818 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044514 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015424 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WBGene00017297 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in cephalic sheath cell and excretory system based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; pie-1; and hsf-1 based on RNA-seq; proteomic; tiling array; and microarray studies. Is affected by twenty-one chemicals including methylmercuric chloride; rotenone; and manganese chloride based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4440); NTF2-like domain superfamily; and Domain of unknown function DUF4440. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y105C5B.5a | |||||||
| Corresponding_transcript | Y105C5B.5b | ||||||||
| Y105C5B.5a.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf998794 | ||||||||
| WBsf1018817 | |||||||||
| WBsf231257 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036480 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055207 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025053 | ||||||||
| Expr1158743 | |||||||||
| Expr2006961 | |||||||||
| Expr2025183 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (210) | |||||||||
| Interaction | WBInteraction000549438 | ||||||||
| WBInteraction000549448 | |||||||||
| WBInteraction000550255 | |||||||||
| WBInteraction000551781 | |||||||||
| WBInteraction000577993 | |||||||||
| Map_info | Positive | Positive_clone | Y105C5B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 14.4556 | |||||||
| Method | Gene |
