WormBase Tree Display for Gene: WBGene00015337
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WBGene00015337 | SMap | S_parent | Sequence | C02D5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | gsto-2 | Paper_evidence | WBPaper00031042 | |||
Sequence_name | C02D5.3 | ||||||
Molecular_name | C02D5.3 | ||||||
C02D5.3.1 | |||||||
CE39555 | |||||||
Other_name | CELE_C02D5.3 | Accession_evidence | NDB | BX284603 | |||
Public_name | gsto-2 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gsto | ||||||
Allele (21) | |||||||
In_cluster | conserved_RDE-1_cluster | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (17) | |||||||
Ortholog (34) | |||||||
Paralog | WBGene00001792 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00016204 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00043097 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019636 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00001365 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001371 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001790 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001791 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008920 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00021817 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | C02D5.3 is predicted to encode, by alternative splicing and an internal promoter, three partially non-overlapping putative omega-class glutathione transferases (GST; EC 2.5.1.18) which, like their paralog GSTO-1, might have thiol oxidoreductase and dehydroascorbate reductase activity; other C02D5.3 paralogs include GST-44 and K10F12.4; C02D5.3 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00031042 | |||
WBPaper00031083 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 16 Oct 2007 00:00:00 | ||||||
Automated_description | Predicted to enable glutathione dehydrogenase (ascorbate) activity and glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Predicted to be located in cytoplasm. Expressed in head; intestine; and tail. Human ortholog(s) of this gene implicated in Alzheimer's disease; Parkinson's disease; and asthma. Is an ortholog of human GSTO1 (glutathione S-transferase omega 1) and GSTO2 (glutathione S-transferase omega 2). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13312,HGNC:23064) | ||
DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23064) | ||||
DOID:14330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13312,HGNC:23064) | ||||
Molecular_info | Corresponding_CDS | C02D5.3 | |||||
Corresponding_CDS_history | C02D5.3:wp92 | ||||||
C02D5.3:wp102 | |||||||
C02D5.3:wp150 | |||||||
C02D5.3a:wp214 | |||||||
Corresponding_transcript | C02D5.3.1 | ||||||
Other_sequence | CBC03728_1 | ||||||
Associated_feature | WBsf993393 | ||||||
WBsf225438 | |||||||
Experimental_info | RNAi_result | WBRNAi00005474 | Inferred_automatically | RNAi_primary | |||
WBRNAi00009988 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039415 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115491 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005901 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028343 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115553 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr8013 | ||||||
Expr1027147 | |||||||
Expr1143530 | |||||||
Expr2012337 | |||||||
Expr2030574 | |||||||
Drives_construct | WBCnstr00000768 | ||||||
WBCnstr00007146 | |||||||
WBCnstr00028922 | |||||||
Construct_product | WBCnstr00028922 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (87) | |||||||
Interaction (6) | |||||||
Map_info | Map | III | Position | -0.250997 | Error | 0.001097 | |
Positive | Positive_clone | C02D5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031184 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00062515 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |