WormBase Tree Display for Sequence: C02D5
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| C02D5 | DNA | C02D5 | 28737 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00043097 | 4615 | 6292 | |
| WBGene00015335 | 13586 | 15476 | ||||
| WBGene00195936 | 23181 | 23042 | ||||
| WBGene00015336 | 9785 | 11648 | ||||
| WBGene00015337 | 7222 | 8194 | ||||
| CDS_child (117) | ||||||
| Transcript | C02D5.2c | 10374 | 11431 | |||
| C02D5.5 | 23181 | 23042 | ||||
| C02D5.1.1 | 13586 | 15476 | ||||
| C02D5.2a.1 | 9785 | 11648 | ||||
| C02D5.2b.1 | 9965 | 11431 | ||||
| C02D5.3.1 | 7222 | 8194 | ||||
| C02D5.4.1 | 5005 | 6280 | ||||
| C02D5.4.2 | 4615 | 6292 | ||||
| PCR_product (20) | ||||||
| Allele (376) | ||||||
| Oligo_set | Aff_C02D5.1 | 14353 | 15417 | |||
| Aff_C02D5.2 | 10570 | 11426 | ||||
| Aff_C02D5.3 | 7238 | 8126 | ||||
| Feature_object (210) | ||||||
| Feature_data | C02D5:Polysome | 1 | 28737 | |||
| C02D5:TranscriptionallyActiveRegion | 1 | 28737 | ||||
| C02D5:ChIPSeqTF | 1 | 28737 | ||||
| C02D5:TRF | 1 | 28737 | ||||
| C02D5:Dust | 1 | 28737 | ||||
| C02D5:inverted | 1 | 28737 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | C06E1 | 28538 | ||||
| Overlap_left | ZC21 | |||||
| Clone_left_end | C06E1 | 21153 | ||||
| Clone_right_end | ZC21 | 200 | ||||
| C02D5 | 28737 | |||||
| DB_info | Database | EMBL | NDB_AC | FO080279 | ||
| NDB_ID | _L16622 | |||||
| NDB_SV | FO080279.2 | |||||
| Secondary_accession | L16622 | |||||
| DB_remark | The 5' clone is ZC21, 200 bp overlap; the 3' clone is C06E1, 200 bp overlap. Actual end of this clone is at base position 28735 of C02D5. | |||||
| [121025] Sequence correction: SNP 0 bases @ 16472 | ||||||
| [121025] Sequence correction WBsf268482 : Insertion C1 bases from @ 1003 | ||||||
| [121025] Sequence correction WBsf267903 : Insertion A1 bases from @ 16385 | ||||||
| [121025] Sequence correction WBsf268202 : Insertion C1 bases from @ 22940 | ||||||
| [121025] Sequence correction WBsf268239 : Deletion C-1 bases @ 26914 | ||||||
| [121025] Sequence correction WBsf267820 : Deletion C-1 bases @ 28155 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Du Z | ||||
| From_laboratory | RW | |||||
| Date | 15 Sep 1993 00:00:00 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C02D5 | ||||
| Reference | WBPaper00015125 | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | bf6406dd1c480cf640cda6d963df18d2 | ||||
| Status | Finished | |||||
| Submitted | 15 Sep 1993 00:00:00 | |||||
| Map | Sequence-III | |||||
| Interpolated_map_position | III | -0.248324 | ||||
| Method | Genomic_canonical |
