WormBase Tree Display for Gene: WBGene00012590

WBGene00012590 SMap: S_parent: Sequence: Y38E10A
  Identity: Version: 2
    Name: CGC_name: nspe-3 Person_evidence: WBPerson1983
      Sequence_name: Y38E10A.12
      Molecular_name: Y38E10A.12
        Y38E10A.12.1
        CE21592
      Other_name: CELE_Y38E10A.12 Accession_evidence: NDB BX284602
      Public_name: nspe-3
    DB_info: Database: AceView gene 2M907
        WormQTL gene WBGene00012590
        WormFlux gene WBGene00012590
        NDB locus_tag CELE_Y38E10A.12
        Panther gene CAEEL|WormBase=WBGene00012590|UniProtKB=Q9NAJ9
          family PTHR34602
        NCBI gene 189659
        RefSeq protein NM_064294.3
        TREEFAM TREEFAM_ID TF319947
        TrEMBL UniProtAcc Q9NAJ9
        UniProt_GCRP UniProtAcc Q9NAJ9
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 19 Nov 2008 14:26:07 WBPerson2970 Name_change: CGC_name: nspe-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspe
    Allele (19)
    RNASeq_FPKM (74)
    Ortholog (62)
    Paralog: WBGene00012587 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012589 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012594 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012593 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00175028 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012604 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012591 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012603 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in body wall muscle cell; germline precursor cell; and intestine based on tiling array and microarray studies. Is affected by several genes including daf-16; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; Rifampin; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38E10A.12
    Corresponding_transcript: Y38E10A.12.1
    Associated_feature: WBsf644761
      WBsf990152
      WBsf1013463
  Experimental_info: RNAi_result: WBRNAi00020282 Inferred_automatically: RNAi_primary
      WBRNAi00056012 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1159530
      Expr2014489
      Expr2032728
    Drives_construct: WBCnstr00029896
    Construct_product: WBCnstr00029896
    Microarray_results (15)
    Expression_cluster (71)
    Interaction: WBInteraction000505027
      WBInteraction000519719
  Map_info: Map: II Position: 10.5006
    Positive: Positive_clone: Y38E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene