WormBase Tree Display for Gene: WBGene00008073
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| WBGene00008073 | SMap | S_parent | Sequence | C43F9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C43F9.5 | |||||||
| Molecular_name | C43F9.5 | ||||||||
| C43F9.5.1 | |||||||||
| CE19733 | |||||||||
| Other_name | CELE_C43F9.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C43F9.5 | ||||||||
| DB_info | Database | AceView | gene | 4L354 | |||||
| WormQTL | gene | WBGene00008073 | |||||||
| WormFlux | gene | WBGene00008073 | |||||||
| NDB | locus_tag | CELE_C43F9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008073|UniProtKB=Q9XUG6 | |||||||
| family | PTHR34150 | ||||||||
| NCBI | gene | 183415 | |||||||
| RefSeq | protein | NM_069556.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315341 | |||||||
| TrEMBL | UniProtAcc | Q9XUG6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUG6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00004156 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00010573 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018492 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00044016 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021504 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022445 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019839 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00235273 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020421 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in g1AL; g1AR; and g1P based on single-cell RNA-seq studies. Is affected by several genes including let-60; eat-2; and sir-2.1 based on tiling array; microarray; and RNA-seq studies. Is affected by ten chemicals including tryptophan; rotenone; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Cysteine-rich repeat. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C43F9.5 | |||||||
| Corresponding_transcript | C43F9.5.1 | ||||||||
| Other_sequence | Dviv_isotig19359 | ||||||||
| Oden_isotig21661 | |||||||||
| Oden_isotig21747 | |||||||||
| Associated_feature | WBsf652145 | ||||||||
| WBsf997657 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042390 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029766 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011888 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026034 | ||||||||
| Expr1146381 | |||||||||
| Expr2001602 | |||||||||
| Expr2019826 | |||||||||
| Drives_construct | WBCnstr00033256 | ||||||||
| Construct_product | WBCnstr00033256 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (72) | |||||||||
| Interaction | WBInteraction000110899 | ||||||||
| WBInteraction000234410 | |||||||||
| WBInteraction000256098 | |||||||||
| WBInteraction000400521 | |||||||||
| Map_info | Positive | Positive_clone | C43F9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.64084 | |||||||
| Method | Gene |
