WormBase Tree Display for Gene: WBGene00007044
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| WBGene00007044 | SMap | S_parent | Sequence | B0495 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | cpna-5 | Person_evidence | WBPerson56 | |||||
| Sequence_name | B0495.10 | ||||||||
| Molecular_name | B0495.10a | ||||||||
| B0495.10a.1 | |||||||||
| CE42047 | |||||||||
| B0495.10b | |||||||||
| CE33022 | |||||||||
| B0495.10c | |||||||||
| CE42048 | |||||||||
| B0495.10b.1 | |||||||||
| B0495.10c.1 | |||||||||
| Other_name | tag-178 | Person_evidence | WBPerson201 | ||||||
| CELE_B0495.10 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | cpna-5 | ||||||||
| DB_info | Database | AceView | gene | 2I2 | |||||
| WormQTL | gene | WBGene00007044 | |||||||
| WormFlux | gene | WBGene00007044 | |||||||
| NDB | locus_tag | CELE_B0495.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007044|UniProtKB=Q09219 | |||||||
| family | PTHR10857 | ||||||||
| NCBI | gene | 174248 | |||||||
| RefSeq | protein | NM_182097.6 | |||||||
| NM_063221.5 | |||||||||
| NM_001381505.2 | |||||||||
| SwissProt | UniProtAcc | Q09219 | |||||||
| UniProt_GCRP | UniProtAcc | Q09219 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 13:09:06 | WBPerson1845 | Event | Created | |||
| 2 | 05 Oct 2005 17:16:52 | WBPerson2970 | Event | Acquires_merge | WBGene00015209 | ||||
| Name_change | Sequence_name | B0495.10 | |||||||
| 3 | 21 Apr 2009 16:04:55 | WBPerson9133 | Name_change | CGC_name | cpna-5 | ||||
| Other_name | tag-178 | ||||||||
| Acquires_merge | WBGene00015209 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpna | ||||||||
| Allele (81) | |||||||||
| Strain | WBStrain00035890 | ||||||||
| WBStrain00036004 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00052921 | ||||||||
| 00052922 | |||||||||
| 00052923 | |||||||||
| 00052924 | |||||||||
| 00052925 | |||||||||
| 00052926 | |||||||||
| 00115252 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00001577 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00006441 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006495 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00007221 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012128 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015061 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium-dependent phospholipid binding activity. Predicted to be involved in cellular response to calcium ion. Predicted to be located in plasma membrane. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0495.10a | |||||||
| B0495.10b | |||||||||
| B0495.10c | |||||||||
| Corresponding_CDS_history | B0495.10a:wp187 | ||||||||
| B0495.10b:wp187 | |||||||||
| B0495.10c:wp187 | |||||||||
| Corresponding_transcript | B0495.10a.1 | ||||||||
| B0495.10b.1 | |||||||||
| B0495.10c.1 | |||||||||
| Other_sequence (40) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009808 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103150 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039109 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr130 | ||||||||
| Expr1028799 | |||||||||
| Expr1033023 | |||||||||
| Expr1143266 | |||||||||
| Expr2010501 | |||||||||
| Expr2028741 | |||||||||
| Drives_construct | WBCnstr00037877 | ||||||||
| Construct_product | WBCnstr00037877 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (205) | |||||||||
| Interaction | WBInteraction000430775 | ||||||||
| WBInteraction000462243 | |||||||||
| Map_info | Map | II | Position | 0.542593 | Error | 0.005352 | |||
| Positive | Positive_clone | B0495 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5562 | |||||||
| 4530 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038626 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | tag-178 is parsed from CGC strain VC581 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
