WormBase Tree Display for Gene: WBGene00006495

WBGene00006495 SMap: S_parent: Sequence: F31D5
  Identity: Version: 3
    Name: CGC_name: cpna-1 Person_evidence: WBPerson56
      Sequence_name: F31D5.3
      Molecular_name: F31D5.3a
        F31D5.3a.1
        CE19827
        F31D5.3b
        CE19828
        F31D5.3c
        CE31797
        F31D5.3b.1
        F31D5.3c.1
      Other_name: tag-149 Person_evidence: WBPerson201
        CELE_F31D5.3 Accession_evidence: NDB BX284602
      Public_name: cpna-1
    DB_info: Database: AceView gene 2E497
        WormQTL gene WBGene00006495
        WormFlux gene WBGene00006495
        NDB locus_tag CELE_F31D5.3
        Panther gene CAEEL|WormBase=WBGene00006495|UniProtKB=H2KYS8
          family PTHR45751
        NCBI gene 173753
        RefSeq protein NM_062335.8
            NM_062336.6
            NM_182185.6
        SwissProt UniProtAcc H2KYS8
        UniProt_GCRP UniProtAcc H2KYS8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:40 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 28 May 2004 14:11:43 WBPerson1971 Event: Acquires_merge: WBGene00017946
        3 22 Apr 2009 15:13:14 WBPerson9133 Name_change: CGC_name: cpna-1
                Other_name: tag-149
      Acquires_merge: WBGene00017946
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpna
    Allele (353)
    Strain: WBStrain00035837
      WBStrain00035946
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog (61)
    Paralog: WBGene00007044 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00001577 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006441 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007221 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012128 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015061 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enables phosphatase binding activity and protein-macromolecule adaptor activity. Involved in positive regulation of sarcomere organization. Located in M band and striated muscle dense body. Expressed in body wall musculature. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F31D5.3a
      F31D5.3b
      F31D5.3c
    Corresponding_CDS_history: F31D5.3d:wp274
    Corresponding_transcript: F31D5.3a.1
      F31D5.3b.1
      F31D5.3c.1
    Other_sequence (45)
    Associated_feature (21)
  Experimental_info: RNAi_result: WBRNAi00081189 Inferred_automatically: RNAi_primary
      WBRNAi00014147 Inferred_automatically: RNAi_primary
      WBRNAi00001543 Inferred_automatically: RNAi_primary
      WBRNAi00046011 Inferred_automatically: RNAi_primary
      WBRNAi00046010 Inferred_automatically: RNAi_primary
      WBRNAi00081193 Inferred_automatically: RNAi_primary
      WBRNAi00092179 Inferred_automatically: RNAi_primary
      WBRNAi00000424 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10608
      Expr1028121
      Expr1032658
      Expr1149909
      Expr2010497
      Expr2028737
    Drives_construct: WBCnstr00037895
    Construct_product: WBCnstr00037895
    Antibody: WBAntibody00002400
      WBAntibody00002541
    Microarray_results (38)
    Expression_cluster (167)
    Interaction (48)
  Map_info: Map: II Position: -5.2629 Error: 0.066146
    Positive: Positive_clone: F31D5 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4377
    Pseudo_map_position
  Reference: WBPaper00034337
    WBPaper00034662
    WBPaper00038626
    WBPaper00041771
    WBPaper00041875
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene