WormBase Tree Display for Gene: WBGene00003541
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| WBGene00003541 | Evidence | Author_evidence | Moehrlen F | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T11F9 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | nas-22 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | T11F9.6 | ||||||||
| Molecular_name | T11F9.6 | ||||||||
| T11F9.6.1 | |||||||||
| CE44156 | |||||||||
| Other_name | CELE_T11F9.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nas-22 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 25 Sep 2009 14:07:44 | WBPerson4025 | Event | Acquires_merge | WBGene00011711 | ||||
| Acquires_merge | WBGene00011711 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele (42) | |||||||||
| Strain | WBStrain00002585 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (33) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-22 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-22::GFP promoter fusion is expressed in the uterus, uterine and vulval muscles, and uterine seam cell. | Paper_evidence | WBPaper00006254 | |||||
| WBPaper00006525 | |||||||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T11F9.6 | |||||||
| Corresponding_CDS_history | T11F9.6:wp207 | ||||||||
| Corresponding_transcript | T11F9.6.1 | ||||||||
| Other_sequence | BU086645.1 | ||||||||
| CJC03528_1 | |||||||||
| Associated_feature | WBsf1001361 | ||||||||
| WBsf1020455 | |||||||||
| WBsf232508 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035483 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035481 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018607 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053131 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053129 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6675 | ||||||||
| Expr6676 | |||||||||
| Expr8920 | |||||||||
| Expr1010588 | |||||||||
| Expr1156735 | |||||||||
| Expr2032111 | |||||||||
| Drives_construct | WBCnstr00003144 | ||||||||
| WBCnstr00003145 | |||||||||
| WBCnstr00013615 | |||||||||
| WBCnstr00030450 | |||||||||
| Construct_product | WBCnstr00013615 | ||||||||
| WBCnstr00030450 | |||||||||
| Microarray_results (37) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction (84) | |||||||||
| Map_info | Map | V | Position | 3.15473 | Error | 0.002755 | |||
| Positive | Positive_clone | T11F9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00043419 | |||||||||
| WBPaper00047343 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
