WormBase Tree Display for Gene: WBGene00007969
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| WBGene00007969 | SMap | S_parent | Sequence | C36A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acs-19 | Person_evidence | WBPerson237 | |||||
| WBPerson2239 | |||||||||
| Sequence_name | C36A4.9 | ||||||||
| Molecular_name | C36A4.9a | ||||||||
| C36A4.9a.1 | |||||||||
| CE03076 | |||||||||
| C36A4.9b | |||||||||
| CE37209 | |||||||||
| C36A4.9b.1 | |||||||||
| Other_name | CELE_C36A4.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | acs-19 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Sep 2008 09:57:25 | WBPerson2970 | Name_change | CGC_name | acs-19 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acs | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00001428 | ||||||||
| WBStrain00001280 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00006351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009221 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012356 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016849 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018269 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018488 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018579 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable acetate-CoA ligase activity. Involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and regulation of response to oxidative stress. Expressed in hypodermis; intestine; neurons; and pharynx. Human ortholog(s) of this gene implicated in lymphangioleiomyomatosis; morbid obesity; and orofacial cleft. Is an ortholog of human ACSS2 (acyl-CoA synthetase short chain family member 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3319 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15814) | ||||
| DOID:0050567 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15814) | ||||||
| DOID:11981 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15814) | ||||||
| Molecular_info (4) | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00002175 | ||||||||
| WBCnstr00004245 | |||||||||
| WBCnstr00011939 | |||||||||
| WBCnstr00021141 | |||||||||
| WBCnstr00033341 | |||||||||
| WBCnstr00042511 | |||||||||
| Construct_product | WBCnstr00033341 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction (93) | |||||||||
| Map_info | Map | III | Position | -4.24766 | Error | 0.000156 | |||
| Positive | Positive_clone | C36A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027009 | ||||||||
| WBPaper00028802 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00043054 | |||||||||
| WBPaper00045076 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059428 | |||||||||
| WBPaper00060084 | |||||||||
| WBPaper00064291 | |||||||||
| WBPaper00065026 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
