WormBase Tree Display for Gene: WBGene00007516

WBGene00007516 SMap: S_parent: Sequence: C11E4
  Identity: Version: 2
    Name: CGC_name: gpx-5 Person_evidence: WBPerson261
      Sequence_name: C11E4.1
      Molecular_name: C11E4.1
        C11E4.1.1
        CE08101
      Other_name: CELE_C11E4.1 Accession_evidence: NDB BX284606
      Public_name: gpx-5
    DB_info: Database: AceView gene XK203
        WormQTL gene WBGene00007516
        WormFlux gene WBGene00007516
        NDB locus_tag CELE_C11E4.1
        Panther gene CAEEL|WormBase=WBGene00007516|UniProtKB=Q93204
          family PTHR11592
        NCBI gene 181178
        RefSeq protein NM_077214.6
        TREEFAM TREEFAM_ID TF105318
        TrEMBL UniProtAcc Q93204
        UniProt_GCRP UniProtAcc Q93204
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Jul 2012 14:20:02 WBPerson2970 Name_change: CGC_name: gpx-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gpx
    Allele (33)
    Strain: WBStrain00002595
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (55)
    Paralog: WBGene00009165 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00007517 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00011045 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020373 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022377 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018850 Caenorhabditis elegans From_analysis: Panther
      WBGene00019846 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description (2)
  Disease_info: Potential_model: DOID:224 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:8778 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:1184 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:3717 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:3910 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:285 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:0060060 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:219 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:5844 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:3572 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:8577 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4554)
      DOID:11758 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:9256 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4554)
      DOID:2527 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:10591 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
      DOID:10763 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
      DOID:4948 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:1324 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
      DOID:1682 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:1287 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
      DOID:418 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:0050083 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:0080199 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4554,HGNC:4555)
      DOID:0080797 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:1240 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:11713 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:1612 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:9119 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:4195 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:1099 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:0050860 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4554,HGNC:4555)
      DOID:9744 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:2355 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:9538 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
      DOID:3748 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:9408 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:10923 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:9352 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:2876 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:1993 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:9261 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:2596 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:0070004 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:4914 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:7941 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:182 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:10590 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:0050731 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:13129 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:10534 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
      DOID:2738 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:6713 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:9952 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:1596 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:5041 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:0060901 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:8552 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:3908 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:3526 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:12858 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4558)
      DOID:9206 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:784 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:12930 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:3021 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4555)
      DOID:3907 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553)
      DOID:3393 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
      DOID:684 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4553,HGNC:4555)
  Molecular_info: Corresponding_CDS: C11E4.1
    Corresponding_CDS_history: C11E4.1:wp83
      C11E4.1:wp178
    Corresponding_transcript: C11E4.1.1
    Other_sequence (80)
    Associated_feature: WBsf648418
      WBsf663182
      WBsf663183
      WBsf1006478
      WBsf1006479
      WBsf1023593
      WBsf236183
  Experimental_info: RNAi_result: WBRNAi00040349 Inferred_automatically: RNAi_primary
      WBRNAi00091322 Inferred_automatically: RNAi_primary
      WBRNAi00040350 Inferred_automatically: RNAi_primary
      WBRNAi00010619 Inferred_automatically: RNAi_primary
      WBRNAi00028806 Inferred_automatically: RNAi_primary
      WBRNAi00115577 Inferred_automatically: RNAi_primary
      WBRNAi00115502 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram759
      Expr5242
      Expr1028068
      Expr1033235
      Expr1144416
      Expr2012219
      Expr2030455
    Drives_construct: WBCnstr00003154
      WBCnstr00033683
    Construct_product: WBCnstr00033683
    Microarray_results (17)
    Expression_cluster (260)
    Interaction: WBInteraction000114668
      WBInteraction000155203
      WBInteraction000519745
      WBInteraction000542764
      WBInteraction000552146
  Map_info: Map: X Position: 1.42294
    Positive: Positive_clone: C11E4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (8)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene