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WormBase Tree Display for Gene: WBGene00030791

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Name Class

WBGene00030791SMapS_parentSequencecb25.fpc2193
IdentityVersion2
NameCGC_nameCbr-lgc-50From_analysisInferred_from_orthology
Sequence_nameCBG09141
Molecular_nameCBG09141
CBG09141.1
CBP45058
Other_nameCBG_09141Accession_evidenceNDBHE601302
Public_nameCbr-lgc-50
DB_infoDatabaseNDBlocus_tagCBG_09141
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:50WBPerson2970Name_changeCGC_nameCbr-lgc-50
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
RNASeq_FPKMWBls:000000210.169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.2651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.56189From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.66533From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.9807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.24417From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.9135From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.267356From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.534713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.729301From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.65319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.392713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.820131From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.24755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.27128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.808833From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.923913From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.20871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.449011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.09179From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.88441From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.11244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.0898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.60212From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.43576From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003512.8944From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.3482From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.1423From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.2098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.65083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
17.4572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.07481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004111.8604From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.42852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.7632From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.09788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.8672From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.8577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.0296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.22602From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.47779From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000632.89224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.51442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.03277From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.26548From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.35046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.53753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.39816From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.54715From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.06153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.35046From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.23822From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.54715From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.8417From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134205
00134206
00134207
00134208
00134209
00134210
Contained_in_operonCBOPA0321
Ortholog (29)
ParalogWBGene00023750Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024072Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024359Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024485Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024487Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024689Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024720Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024721Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024816Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024845Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025000Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025067Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025242Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025402Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025608Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025711Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025881Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025975Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026192Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026681Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027089Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027889Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027890Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027976Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028865Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028900Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028929Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028969Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029209Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029397Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029459Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029484Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029988Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030982Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031802Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031803Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032130Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032131Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032274Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032807Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032847Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033111Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033246Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033345Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033378Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033600Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033800Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033914Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034198Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034435Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034444Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034644Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034869Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034995Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035214Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035453Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035531Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035620Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035884Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035885Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036032Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036209Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036229Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036241Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036242Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036300Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036418Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036579Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036931Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036943Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036969Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037805Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037846Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037974Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037983Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038316Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038367Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038401Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039464Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039476Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039891Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039930Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040158Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040276Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040442Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041064Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041542Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041559Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041596Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041597Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041671Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042017Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042167Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042282Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042775Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042899Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00088409Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00270414Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271497Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271498Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00303210Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00303211Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-50.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09141
Corresponding_CDS_historyCBG09141:bp194
CBG09141:bp255
Corresponding_transcriptCBG09141.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1056571
Microarray_resultsGPL8303_CB6_WBGene00030791_A
GPL14143_CBG09141_243-302_0.868_22_B
GPL14143_CBG09141_456-515_0.842_35_A
GPL14143_CBG09141_909-968_0.874_18_C
MethodGene