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WormBase Tree Display for Gene: WBGene00035885

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Name Class

WBGene00035885SMapS_parentSequencecb25.fpc4030a2
IdentityVersion2
NameCGC_nameCbr-gab-1From_analysisInferred_from_orthology
Sequence_nameCBG15740
Molecular_nameCBG15740
CBG15740.1
CBP40471
Other_nameCBG_15740Accession_evidenceNDBHE600979
Public_nameCbr-gab-1
DB_infoDatabaseNDBlocus_tagCBG_15740
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-gab-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgab
AlleleWBVar00123007
WBVar00123008
WBVar00003029
WBVar00123009
WBVar00123010
WBVar00123006
WBVar00003024
RNASeq_FPKMWBls:00000020.755025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.37127From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.49002From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.34375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.972931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.1721From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.36074From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.140288From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.280576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.514495From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.26291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.049785From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.09957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.201943From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.228756From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.270283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.571986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.203993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.43929From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.53531From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.57856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.05694From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.53443From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.81984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.07627From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.312794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.976157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.29138From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.6066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.65387From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.71994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.193663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.269885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.300881From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.331877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.493301From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.17778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.560692From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.624846From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.789507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.986362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.167317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.441342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.480922From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.512032From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.55089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.733029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.531461From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.541984From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.847295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.733029From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.23877From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.772266From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.25388From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139337
00139338
00139339
00139340
00139341
00139342
00139343
Ortholog (32)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable GABA-A receptor activity and extracellular ligand-gated monoatomic ion channel activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans gab-1. In C. elegans, gab-1 is involved in monoatomic ion transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15740
Corresponding_CDS_historyCBG15740:bp194
CBG15740:bp255
Corresponding_transcriptCBG15740.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1055364
Microarray_resultsGPL8303_CB6_WBGene00035885_A
GPL14143_CBG15740_770-829_0.825_48_B
GPL14143_CBG15740_867-926_0.626_167_C
GPL14143_CBG15740_1540-1599_0.917_4_A
MethodGene