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WormBase Tree Display for Gene: WBGene00037974

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Name Class

WBGene00037974SMapS_parentSequencecb25.fpc4109
IdentityVersion3
NameCGC_nameCbr-lgc-31From_analysisInferred_from_orthology
Sequence_nameCBG18584
Molecular_name (12)
Other_nameCBG_18584Accession_evidenceNDBHE601466
CBG_18582
Public_nameCbr-lgc-31
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lgc-31
331 Aug 2016 10:29:44WBPerson4025EventAcquires_mergeWBGene00037972
Acquires_mergeWBGene00037972
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
AlleleWBVar00025282
WBVar00042639
WBVar00014264
WBVar00014279
WBVar00014284
WBVar00014269
WBVar00126598
WBVar00126599
WBVar00014274
WBVar00042634
RNASeq_FPKMWBls:00000022.92224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.04292From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.43531From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.34078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.48972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.94892From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.98258From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.075239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.258278From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.441318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.700189From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.58401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.29027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
3.4585From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.62673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.87392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.22669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.44914From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.2281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.509337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.34594From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.87491From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.76944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
10.0493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.55769From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.9185From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000354.83614From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.824773From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.52533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.77224From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.01914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.51078From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.67388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.392363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.471702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.520236From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.56877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.889594From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.12554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.1037From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.15147From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.63862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.71181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.401237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.452826From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.488943From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.684061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.689888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.574338From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.586502From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.1819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.52533From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.16312From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.67522From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.38722From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141499
00141500
00141501
00141502
00141503
00141504
Ortholog (32)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-31.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18584a
CBG18584b
CBG18584c
CBG18584d
Corresponding_CDS_historyCBG18584:bp194
CBG18584:bp255
Corresponding_transcriptCBG18584a.1
CBG18584b.1
CBG18584c.1
CBG18584d.1
Other_sequence (29)
Experimental_infoExpr_patternExpr1054135
Expr1065577
Microarray_resultsGPL8303_CB6_WBGene00037972_A
GPL8303_CB6_WBGene00037974_A
GPL8303_CB6_WBGene00037974_B
GPL14143_CBG18582_97-156_0.936_3_C
GPL14143_CBG18582_334-393_0.899_11_B
GPL14143_CBG18582_337-396_0.941_2_A
GPL14143_CBG18584_678-737_0.820_43_C
GPL14143_CBG18584_1307-1366_0.923_5_A
GPL14143_CBG18584_1414-1473_0.946_1_B
MethodGene