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WormBase Tree Display for Gene: WBGene00035531

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Name Class

WBGene00035531SMapS_parentSequencecb25.fpc4010
IdentityVersion3
NameCGC_nameCbr-acr-21.2From_analysisInferred_from_orthology
Sequence_nameCBG15209
Molecular_nameCBG15209a
CBG15209a.1
CBP45039
CBG15209b
CBP47193
CBG15209b.1
Other_nameCBG_15209Accession_evidenceNDBHE601055
Cbr-acr-21From_analysisInferred_from_orthology
Public_nameCbr-acr-21.2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-acr-21
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-acr-21.2
Other_nameCbr-acr-21
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
RNASeq_FPKMWBls:00000020.573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.00673From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.12861From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.31857From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.711281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.919945From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.932865From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.082688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.275586From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.468483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.183724From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.249357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.302924From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.35649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.057292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.274917From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.278202From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.433243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.065224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.283326From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.726657From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.83142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.05737From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.13954From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.37818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.32501From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.20005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.880647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.920768From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.96089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.05697From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.1863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.151297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.1524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.169477From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.186554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.624895From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.00933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.852022From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.94434From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.51749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.64897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.256458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.331595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.335224From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.396628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.406651From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.713348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.365926From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.410012From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.426819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.468483From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.942339From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.450863From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.915245From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139012
00139013
00139014
00139015
00139016
00139017
00139018
00139019
Ortholog (27)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-21.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15209a
CBG15209b
Corresponding_CDS_historyCBG15209:bp194
CBG15209:bp255
Corresponding_transcriptCBG15209a.1
CBG15209b.1
Other_sequenceDviv_isotig30124
PPC01161_1
MH01913
JO468037.1
MHC00632_1
JI170678.1
PP02143
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00035531_A
GPL8303_CB6_WBGene00035531_B
MethodGene