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WormBase Tree Display for Gene: WBGene00012868

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Name Class

WBGene00012868SMapS_parentSequenceCHROMOSOME_IV
IdentityVersion2
NameCGC_nametbc-9Person_evidenceWBPerson524
WBPerson293
Sequence_nameY45F10A.6
Molecular_name (21)
Other_nameCELE_Y45F10A.6Accession_evidenceNDBBX284604
Public_nametbc-9
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
223 Jun 2008 18:34:24WBPerson2970Name_changeCGC_nametbc-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtbc
Allele (573)
StrainWBStrain00001255
RNASeq_FPKM (74)
GO_annotation00000133
Ortholog (59)
ParalogWBGene00007167Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007849Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008018Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009322Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009726Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022880Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016352Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020572Caenorhabditis elegansFrom_analysisPanther
WBGene00044061Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018639Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018075Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018281Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019915Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015410Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012894Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020770Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008444Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable GTPase activator activity. Human ortholog(s) of this gene implicated in nephrotic syndrome type 20. Is an ortholog of several human genes including TBC1D8 (TBC1 domain family member 8); TBC1D9 (TBC1 domain family member 9); and TBC1D9B (TBC1 domain family member 9B).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0070357Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:24715)
Molecular_infoCorresponding_CDSY45F10A.6a
Y45F10A.6b
Y45F10A.6c
Y45F10A.6d
Y45F10A.6e
Y45F10A.6f
Y45F10A.6g
Corresponding_CDS_historyY45F10A.6a:wp167
Y45F10A.6b:wp167
Corresponding_transcriptY45F10A.6a.1
Y45F10A.6b.1
Y45F10A.6c.1
Y45F10A.6d.1
Y45F10A.6e.1
Y45F10A.6f.1
Y45F10A.6g.1
Other_sequence (26)
Associated_feature (23)
Experimental_infoRNAi_resultWBRNAi00000747Inferred_automaticallyRNAi_primary
WBRNAi00076791Inferred_automaticallyRNAi_primary
WBRNAi00056571Inferred_automaticallyRNAi_primary
WBRNAi00020588Inferred_automaticallyRNAi_primary
Expr_patternExpr6977
Expr1015254
Expr1035693
Expr1160041
Expr2017336
Expr2035472
Drives_constructWBCnstr00002150
Microarray_results (31)
Expression_cluster (113)
Interaction (38)
Map_infoMapIVPosition9.29829Error0.012949
PositivePositive_cloneY45F10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00041771
WBPaper00055090
WBPaper00059258
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene