WormBase Tree Display for Gene: WBGene00009322
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| WBGene00009322 | SMap | S_parent | Sequence | F32B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tbc-3 | Person_evidence | WBPerson293 | |||||
| Sequence_name | F32B6.8 | ||||||||
| Molecular_name | F32B6.8a | ||||||||
| F32B6.8a.1 | |||||||||
| CE35519 | |||||||||
| F32B6.8b | |||||||||
| CE09863 | |||||||||
| F32B6.8b.1 | |||||||||
| Other_name | CELE_F32B6.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | tbc-3 | ||||||||
| DB_info | Database | AceView | gene | 4K665 | |||||
| WormQTL | gene | WBGene00009322 | |||||||
| WormFlux | gene | WBGene00009322 | |||||||
| NDB | locus_tag | CELE_F32B6.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009322|UniProtKB=O45434 | |||||||
| family | PTHR22957 | ||||||||
| NCBI | gene | 177845 | |||||||
| RefSeq | protein | NM_001027994.4 | |||||||
| NM_001027993.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF314211 | |||||||
| TrEMBL | UniProtAcc | O45434 | |||||||
| Q7JL36 | |||||||||
| UniProt_GCRP | UniProtAcc | O45434 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Jun 2008 15:16:23 | WBPerson2970 | Name_change | CGC_name | tbc-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tbc | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034503 | ||||||||
| 00034504 | |||||||||
| Ortholog (42) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable GTPase activator activity. Located in Golgi apparatus. Expressed in hermaphrodite distal tip cell; neurons; pharynx; rect_D; and seam cell. Is an ortholog of human TBC1D22A (TBC1 domain family member 22A) and TBC1D22B (TBC1 domain family member 22B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F32B6.8a | |||||||
| F32B6.8b | |||||||||
| Corresponding_CDS_history | F32B6.8:wp109 | ||||||||
| Corresponding_transcript | F32B6.8a.1 | ||||||||
| F32B6.8b.1 | |||||||||
| Other_sequence (55) | |||||||||
| Associated_feature | WBsf646263 | ||||||||
| WBsf646264 | |||||||||
| WBsf655048 | |||||||||
| WBsf977242 | |||||||||
| WBsf977243 | |||||||||
| WBsf977244 | |||||||||
| WBsf977245 | |||||||||
| WBsf997499 | |||||||||
| WBsf228900 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001326 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014210 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00099145 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046119 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031669 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00099085 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8101 | ||||||||
| Expr8102 | |||||||||
| Expr8103 | |||||||||
| Expr8104 | |||||||||
| Expr1026877 | |||||||||
| Expr1034075 | |||||||||
| Expr1150002 | |||||||||
| Expr2017332 | |||||||||
| Expr2035468 | |||||||||
| Drives_construct | WBCnstr00005069 | ||||||||
| WBCnstr00005070 | |||||||||
| WBCnstr00005072 | |||||||||
| WBCnstr00032287 | |||||||||
| Construct_product | WBCnstr00005071 | ||||||||
| WBCnstr00005072 | |||||||||
| WBCnstr00032287 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Map | IV | Position | 4.44363 | Error | 0.00101 | |||
| Positive | Positive_clone | F32B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031898 | ||||||||
| WBPaper00032018 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062529 | |||||||||
| WBPaper00062730 | |||||||||
| WBPaper00063563 | |||||||||
| WBPaper00066109 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
