WormBase Tree Display for Gene: WBGene00022880

WBGene00022880 SMap: S_parent: Sequence: ZK1248
  Identity: Version: 2
    Name: CGC_name: tbc-2 Person_evidence: WBPerson524
            WBPerson293
      Sequence_name: ZK1248.10
      Molecular_name: ZK1248.10
        ZK1248.10.1
        CE29155
      Other_name: CELE_ZK1248.10 Accession_evidence: NDB BX284602
      Public_name: tbc-2
    DB_info: Database: AceView gene 2G114
        WormQTL gene WBGene00022880
        WormFlux gene WBGene00022880
        NDB locus_tag CELE_ZK1248.10
        Panther gene CAEEL|WormBase=WBGene00022880|UniProtKB=Q23419
          family PTHR22957
        NCBI gene 173986
        RefSeq protein NM_062755.9
        TREEFAM TREEFAM_ID TF317336
        TrEMBL UniProtAcc Q23419
        UniProt_GCRP UniProtAcc Q23419
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:06 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 23 Jun 2008 18:34:24 WBPerson2970 Name_change: CGC_name: tbc-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tbc
    Allele (51)
    Strain: WBStrain00031265
      WBStrain00047446
    RNASeq_FPKM (74)
    GO_annotation (14)
    Contained_in_operon: CEOP2224
    Ortholog (43)
    Paralog (17)
    Structured_description: Automated_description: Enables GTPase activator activity. Involved in positive regulation of early endosome to late endosome transport and regulation of presynaptic dense core granule exocytosis. Located in cholinergic synapse and late endosome. Expressed in gonadal sheath cell; hypodermis; intestine; and pharyngeal muscle cell. Is an ortholog of human TBC1D2 (TBC1 domain family member 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1248.10
    Corresponding_transcript: ZK1248.10.1
    Other_sequence (29)
    Associated_feature: WBsf650095
      WBsf665558
      WBsf223102
      WBsf223103
  Experimental_info: RNAi_result: WBRNAi00077887 Inferred_automatically: RNAi_primary
      WBRNAi00076877 Inferred_automatically: RNAi_primary
      WBRNAi00007639 Inferred_automatically: RNAi_primary
      WBRNAi00059181 Inferred_automatically: RNAi_primary
      WBRNAi00021842 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8740
      Expr9042
      Expr12475
      Expr1027382
      Expr1040120
      Expr1162600
      Expr2017331
      Expr2035467
    Drives_construct: WBCnstr00005656
      WBCnstr00023899
    Construct_product: WBCnstr00005656
      WBCnstr00005658
      WBCnstr00006147
      WBCnstr00006148
      WBCnstr00023899
    Microarray_results (20)
    Expression_cluster (116)
    Interaction (53)
  Map_info: Map: II Position: -0.904826 Error: 0.004151
    Positive: Positive_clone: ZK1248 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (26)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene