WormBase Tree Display for Gene: WBGene00009726
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WBGene00009726 | SMap | S_parent | Sequence | F45E6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tbc-13 | Person_evidence | WBPerson524 | |||||
WBPerson293 | |||||||||
Sequence_name | F45E6.3 | ||||||||
Molecular_name | F45E6.3 | ||||||||
F45E6.3.1 | |||||||||
CE53385 | |||||||||
F45E6.3.2 | |||||||||
Other_name | CELE_F45E6.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | tbc-13 | ||||||||
DB_info | Database | AceView | gene | XN109 | |||||
WormQTL | gene | WBGene00009726 | |||||||
WormFlux | gene | WBGene00009726 | |||||||
NDB | locus_tag | CELE_F45E6.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009726|UniProtKB=Q20436 | |||||||
family | PTHR22957 | ||||||||
NCBI | gene | 181406 | |||||||
RefSeq | protein | NM_001373530.1 | |||||||
TREEFAM | TREEFAM_ID | TF105911 | |||||||
TrEMBL | UniProtAcc | Q20436 | |||||||
UniProt_GCRP | UniProtAcc | Q20436 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 23 Jun 2008 18:34:24 | WBPerson2970 | Name_change | CGC_name | tbc-13 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tbc | ||||||||
Allele (118) | |||||||||
Strain | WBStrain00002984 | ||||||||
WBStrain00032212 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00068152 | ||||||||
00068153 | |||||||||
Contained_in_operon | CEOPX108 | ||||||||
Ortholog (33) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Predicted to enable GTPase activator activity. Predicted to be involved in intracellular protein transport. Is an ortholog of human TBC1D13 (TBC1 domain family member 13). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F45E6.3 | |||||||
Corresponding_CDS_history | F45E6.3:wp101 | ||||||||
F45E6.3:wp271 | |||||||||
Corresponding_transcript | F45E6.3.1 | ||||||||
F45E6.3.2 | |||||||||
Other_sequence (24) | |||||||||
Associated_feature | WBsf1007313 | ||||||||
WBsf1007314 | |||||||||
WBsf1007315 | |||||||||
WBsf1024057 | |||||||||
WBsf236496 | |||||||||
Experimental_info | RNAi_result | WBRNAi00001592 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015029 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047417 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032311 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1287 | ||||||||
Expr6079 | |||||||||
Expr1026590 | |||||||||
Expr1034254 | |||||||||
Expr1151259 | |||||||||
Expr2017323 | |||||||||
Expr2035459 | |||||||||
Drives_construct | WBCnstr00003486 | ||||||||
WBCnstr00031963 | |||||||||
Construct_product | WBCnstr00031963 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (82) | |||||||||
Interaction | WBInteraction000298841 | ||||||||
WBInteraction000422583 | |||||||||
WBInteraction000539154 | |||||||||
Map_info | Map | X | Position | 7.12031 | Error | 0.002616 | |||
Positive | Positive_clone | F45E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |