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WormBase Tree Display for Gene: WBGene00016419

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Name Class

WBGene00016419SMapS_parentSequenceC34G6
IdentityVersion2
NameCGC_nametyr-4Person_evidenceWBPerson69
Sequence_nameC34G6.2
Molecular_nameC34G6.2
C34G6.2.1
CE08574
Other_nameCELE_C34G6.2Accession_evidenceNDBBX284601
Public_nametyr-4
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change (2)
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtyr
Allele (44)
StrainWBStrain00031924
RNASeq_FPKM (74)
GO_annotation00024775
00122059
Ortholog (46)
ParalogWBGene00009001Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010060Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010661Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015332Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021553Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022231Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017483Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human DCT (dopachrome tautomerase); TYR (tyrosinase); and TYRP1 (tyrosinase related protein 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050633Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:8465Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0070097Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12450)
DOID:8923Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0050632Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709)
DOID:12306Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0070095Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0070094Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:1909Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:10123Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450)
Molecular_infoCorresponding_CDSC34G6.2
Corresponding_transcriptC34G6.2.1
Other_sequenceGPC00773_1
JI175612.1
HG08456
Oden_isotig28382
ES741208.1
GP01349
ACC12891_1
JI167525.1
Oden_isotig24062
GP00144
OOC02687_1
Oden_isotig21980
ACC13333_1
BXC00809_1
Oden_isotig25876
EX565319.1
GPC00633_1
PP02555
MHC08297_1
Oden_isotig23990
EY471748.1
MAC00577_1
OFC00690_1
Dviv_isotig19515
HBC09297_1
MH10231
EX543524.1
JI482770.1
JI180031.1
EW743995.1
Hbac_isotig07717
ACC10306_1
CJC06472_1
Dviv_isotig19514
HGC08490_1
HSC00770_1
GT738128.1
OF01282
MA01266
FG589538.1
JI475897.1
Oden_isotig23753
BXC03867_1
HS01042
Dviv_isotig27906
JI464508.1
PPC02458_1
Associated_featureWBsf656345
WBsf217724
WBsf217725
WBsf217726
Experimental_infoRNAi_resultWBRNAi00098215Inferred_automaticallyRNAi_primary
WBRNAi00029552Inferred_automaticallyRNAi_primary
WBRNAi00003081Inferred_automaticallyRNAi_primary
WBRNAi00098219Inferred_automaticallyRNAi_primary
WBRNAi00001841Inferred_automaticallyRNAi_primary
WBRNAi00041928Inferred_automaticallyRNAi_primary
Expr_patternExpr1010270
Expr1037037
Expr1145935
Expr2017688
Expr2035826
Drives_constructWBCnstr00028083
Construct_productWBCnstr00028083
Microarray_results (19)
Expression_cluster (185)
Interaction (25)
Map_info (4)
ReferenceWBPaper00044177
WBPaper00055090
WBPaper00061547
WBPaper00065140
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene