WormBase Tree Display for Gene: WBGene00020924

WBGene00020924 SMap: S_parent: Sequence: W02B3
  Identity: Version: 1
    Name (4)
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (87)
    Strain: WBStrain00003334
    RNASeq_FPKM (74)
    GO_annotation: 00053424
      00053425
      00053426
    Ortholog: WBGene00035559 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00064846 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00159196 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00122472 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00113240 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00229122 Brugia malayi From_analysis: WormBase-Compara
      WBGene00229123 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g10307 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g14121 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g3073 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g3074 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g3075 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5165 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12547 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22373 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g3542 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g7676 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6872 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_III.g8366 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_03483.g30342 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19068 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_011891 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05802 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16373 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30328800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30328900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g6798 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248455 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00276626 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00291960 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003822 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Panther
      SGD:S000001684 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-070410-96 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3622 Homo sapiens From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2179507 Mus musculus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310087 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00011554 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00017877 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00020307 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00020308 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00020309 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00021249 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00020927 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00045475 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0050560 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
      DOID:0050559 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
      DOID:0110443 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
      DOID:9884 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
      DOID:0112379 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
      DOID:0110296 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
      DOID:0110444 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
      DOID:0110284 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3622)
  Molecular_info: Corresponding_CDS: W02B3.4
    Corresponding_CDS_history: W02B3.4:wp102
    Corresponding_transcript: W02B3.4.1
    Other_sequence: Acan_isotig16043
    Associated_feature: WBsf226121
  Experimental_info: RNAi_result: WBRNAi00036177 Inferred_automatically: RNAi_primary
      WBRNAi00054567 Inferred_automatically: RNAi_primary
      WBRNAi00006634 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram182
      Expr6820
      Expr1022840
      Expr1158113
      Expr2006684
      Expr2024901
    Drives_construct: WBCnstr00003805
      WBCnstr00024782
    Construct_product: WBCnstr00024782
    Microarray_results (19)
    Expression_cluster (100)
  Map_info: Positive: Positive_clone: W02B3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -26.2854
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00062840
    WBPaper00065080
  Method: Gene