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WormBase Tree Display for Gene: WBGene00009622

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Name Class

WBGene00009622SMapS_parentSequenceF41E7
IdentityVersion1
NameSequence_nameF41E7.6
Molecular_nameF41E7.6
F41E7.6.1
CE53287
Other_nameCELE_F41E7.6Accession_evidenceNDBBX284606
Public_nameF41E7.6
DB_infoDatabaseAceViewgeneXK926
WormQTLgeneWBGene00009622
WormFluxgeneWBGene00009622
NDBlocus_tagCELE_F41E7.6
PanthergeneCAEEL|WormBase=WBGene00009622|UniProtKB=Q20278
familyPTHR22589
NCBIgene185624
RefSeqproteinNM_001373468.2
TrEMBLUniProtAccQ20278
UniProt_GCRPUniProtAccQ20278
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (60)
RNASeq_FPKM (74)
GO_annotation00067679
00067680
00067681
00117269
OrthologWBGene00058489Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00036912Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00149430Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g2900Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g9701Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17536Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16047Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25154Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12750Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1856Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19594Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15870Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-F41E7.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13712Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13713Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00005.g353Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01349Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023554Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_X0069400Caenorhabditis inopinataFrom_analysisWormBase-Compara
FB:FBgn0039543Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050522-35Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:2366Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1921364Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:70908Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00000481Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007175Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008629Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011122Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011850Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012907Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021002Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021703Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019644Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020911Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carnitine O-octanoyltransferase activity. Predicted to be located in peroxisome. Expressed in anal depressor muscle; anal sphincter muscle; intestinal muscle; neurons; and pharyngeal-intestinal valve. Is an ortholog of human CROT (carnitine O-octanoyltransferase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF41E7.6
Corresponding_CDS_historyF41E7.6:wp196
F41E7.6:wp271
Corresponding_transcriptF41E7.6.1
Experimental_infoRNAi_resultWBRNAi00102597Inferred_automaticallyRNAi_primary
WBRNAi00047005Inferred_automaticallyRNAi_primary
WBRNAi00014757Inferred_automaticallyRNAi_primary
Expr_pattern (6)
Drives_constructWBCnstr00010529
WBCnstr00011215
WBCnstr00032047
Construct_productWBCnstr00032047
Microarray_results (16)
Expression_cluster (90)
InteractionWBInteraction000184479
WBInteraction000294736
WBInteraction000331641
WBInteraction000403133
WBInteraction000419625
WBInteraction000433060
Map_infoPositivePositive_cloneF41E7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX1.95161
ReferenceWBPaper00029292
WBPaper00038491
WBPaper00042257
WBPaper00055090
MethodGene