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WormBase Tree Display for Gene: WBGene00007680

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Name Class

WBGene00007680SMapS_parentSequenceC18D11
IdentityVersion2
NameCGC_namemaa-1
Sequence_nameC18D11.2
Molecular_nameC18D11.2
C18D11.2.1
CE18513
Other_nameCELE_C18D11.2Accession_evidenceNDBBX284603
Public_namemaa-1
DB_infoDatabaseAceViewgene3M910
WormQTLgeneWBGene00007680
WormFluxgeneWBGene00007680
NDBlocus_tagCELE_C18D11.2
PanthergeneCAEEL|WormBase=WBGene00007680|UniProtKB=Q9XTZ5
familyPTHR23310
NCBIgene176612
RefSeqproteinNM_067130.6
TREEFAMTREEFAM_IDTF319446
TrEMBLUniProtAccQ9XTZ5
UniProt_GCRPUniProtAccQ9XTZ5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
202 Jul 2004 16:55:44WBPerson1971Name_changeCGC_namemaa-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmaa
Allele (57)
StrainWBStrain00032337
WBStrain00035474
RNASeq_FPKM (74)
GO_annotation (17)
OrthologWBGene00063022Caenorhabditis remaneiFrom_analysis (4)
WBGene00034076Caenorhabditis briggsaeFrom_analysis (5)
WBGene00141852Caenorhabditis brenneriFrom_analysis (4)
WBGene00090361Pristionchus pacificusFrom_analysis (2)
WBGene00136335Caenorhabditis japonicaFrom_analysis (4)
WBGene00096170Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00096175Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00224439Brugia malayiFrom_analysisWormBase-Compara
WBGene00225519Brugia malayiFrom_analysisWormBase-Compara
WBGene00229362Brugia malayiFrom_analysisWormBase-Compara
CSP21.g4017Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6353Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11677Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22648Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11036Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3397Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16821Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28929Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4337Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20640Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-maa-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14924Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00239.g7723Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_21021Caenorhabditis latensFrom_analysisWormBase-Compara
Pan_g9771Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30087110Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g9101Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238981Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245847Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246631Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00258856Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261165Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0031478Drosophila melanogasterFrom_analysis (3)
ZFIN:ZDB-GENE-040426-2074Danio rerioFrom_analysis (4)
HGNC:23337Homo sapiensFrom_analysis (3)
MGI:1921409Mus musculusFrom_analysis (4)
RGD:1308404Rattus norvegicusFrom_analysis (4)
RGD:1309411Rattus norvegicusFrom_analysis (4)
ParalogWBGene00001153Caenorhabditis elegansFrom_analysis (2)
WBGene00016655Caenorhabditis elegansFrom_analysis (2)
WBGene00044603Caenorhabditis elegansFrom_analysisPanther
WBGene00018949Caenorhabditis elegansFrom_analysis (2)
WBGene00009818Caenorhabditis elegansFrom_analysis (2)
WBGene00012457Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionmaa-1 encodes a novel, transmembrane acyl-CoA-binding protein; maa-1 activity, together with that of rme-1, is required for normal rates of endosomal recycling and for proper endosomal shape and morphology; a rescuing MAA-1::GFP fusion protein is expressed in the hypodermis (excluding the seam cells) and the intestine, as well as in an area near the dorsal and ventral nerve cords; within the hypodermis and intestine, MAA-1::GFP localizes to endosomal and Golgi vesicle membranes.Paper_evidenceWBPaper00028338
Curator_confirmedWBPerson1843
Date_last_updated20 Feb 2008 00:00:00
Automated_descriptionEnables fatty-acyl-CoA binding activity. Involved in endocytic recycling; endosome organization; and multicellular organism reproduction. Located in apical part of cell; basal part of cell; and bounding membrane of organelle. Expressed in hypodermis. Is an ortholog of human ACBD4 (acyl-CoA binding domain containing 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC18D11.2
Corresponding_transcriptC18D11.2.1
Other_sequenceCRC10935_1
CBC05789_1
CJC13489_1
ACC00514_1
CR04599
Associated_featureWBsf651519
WBsf227602
Experimental_infoRNAi_resultWBRNAi00010998Inferred_automaticallyRNAi_primary
WBRNAi00006289Inferred_automaticallyRNAi_primary
WBRNAi00029068Inferred_automaticallyRNAi_primary
WBRNAi00040923Inferred_automaticallyRNAi_primary
Expr_patternExpr8267
Expr1028301
Expr1033316
Expr1144969
Expr2013321
Expr2031553
Drives_constructWBCnstr00013222
Construct_productWBCnstr00013222
Microarray_results (19)
Expression_cluster (138)
InteractionWBInteraction000008868
WBInteraction000336528
Map_infoMapIIIPosition13.2516Error0.003717
PositivePositive_cloneC18D11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00024788
WBPaper00025957
WBPaper00027024
WBPaper00027392
WBPaper00028338
WBPaper00038491
WBPaper00052849
WBPaper00055090
WBPaper00062625
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene