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WormBase Tree Display for Gene: WBGene00001426

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Name Class

WBGene00001426SMapS_parentSequenceF36H1
IdentityVersion1
NameCGC_namefkb-1Person_evidenceWBPerson466
Sequence_nameF36H1.1
Molecular_nameF36H1.1a
F36H1.1a.1
CE05813
F36H1.1b
CE45833
F36H1.1b.1
Other_nameCELE_F36H1.1Accession_evidenceNDBBX284604
Public_namefkb-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfkb
Allele (14)
RNASeq_FPKM (74)
GO_annotation00008538
00008539
00008540
00008541
00008542
00008543
00108690
00108691
00108692
OrthologWBGene00062513Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00028338Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00162661Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00134439Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00063554Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00056209Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00154492Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00140132Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00124563Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00227992Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8354Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3433Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16114Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g2199Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23767Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2164Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17904Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16430Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g7926Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18104Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17302Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00621.g12883Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-fkb-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8013Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00007.g477Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12837Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014040Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10480Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40311800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11748Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241246Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00111396Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00296967Trichuris murisFrom_analysisWormBase-Compara
WBGene00301865Trichuris murisFrom_analysisWormBase-Compara
WBGene00301922Trichuris murisFrom_analysisWormBase-Compara
SGD:S000002927Saccharomyces cerevisiaeFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0037930Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040912-126Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:3718Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
PhylomeDB
SonicParanoid
MGI:95542Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
RGD:1560660Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
ParalogWBGene00001433Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001427Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001431Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001428Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001429Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001430Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001432Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionfkb-1 encodes a homolog of mouse FK506-binding protein 2.Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding. Is an ortholog of human FKBP2 (FKBP prolyl isomerase 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF36H1.1a
F36H1.1b
Corresponding_transcriptF36H1.1a.1
F36H1.1b.1
Other_sequence (83)
Associated_feature (9)
Experimental_infoRNAi_resultWBRNAi00046514Inferred_automaticallyRNAi_primary
WBRNAi00014435Inferred_automaticallyRNAi_primary
WBRNAi00076383Inferred_automaticallyRNAi_primary
Expr_patternExpr16135
Expr1028177
Expr1030851
Expr1150396
Expr2011795
Expr2030033
Drives_constructWBCnstr00036958
Construct_productWBCnstr00036958
Microarray_results (23)
Expression_cluster (104)
Interaction (36)
Map_infoMapIVPosition4.79776Error0.00098
PositivePositive_cloneF36H1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00004285
WBPaper00026884
WBPaper00038491
WBPaper00055090
WBPaper00061547
WBPaper00062388
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene