WormBase Tree Display for Gene: WBGene00000523

WBGene00000523 Evidence: Person_evidence: WBPerson765
  SMap: S_parent: Sequence: C01C10
  Identity: Version: 1
    Name: CGC_name: clc-2
      Sequence_name: C01C10.1
      Molecular_name: C01C10.1a
        C01C10.1a.1
        CE28881
        C01C10.1b
        CE53399
        C01C10.1b.1
      Other_name: CELE_C01C10.1 Accession_evidence: NDB BX284606
      Public_name: clc-2
    DB_info: Database: AceView gene XI51
        WormQTL gene WBGene00000523
        WormFlux gene WBGene00000523
        NDB locus_tag CELE_C01C10.1
        Panther gene CAEEL|WormBase=WBGene00000523|UniProtKB=Q11085
          family PTHR10671
        NCBI gene 180999
        RefSeq protein NM_001375068.3
            NM_076856.7
        SwissProt UniProtAcc Q11085
        TrEMBL UniProtAcc A0A4V0IK28
        UniProt_GCRP UniProtAcc Q11085
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clc
    Allele (46)
    Strain: WBStrain00032009
    RNASeq_FPKM (74)
    GO_annotation: 00003803
      00003804
      00057138
      00057139
      00057140
      00057141
      00057142
      00107533
    Contained_in_operon: CEOPX088
    Ortholog: WBGene00051332 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00036566 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144516 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00134233 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00082818 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00222132 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2857 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1610 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11406 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19934 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2910 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20516 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1735 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6124 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16058 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21233 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-clc-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12464 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00158.g5901 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00177 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024773 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01109 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g655 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0204900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19408 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240486 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258983 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00000522 Caenorhabditis elegans From_analysis: Panther
      WBGene00000526 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00013458
      WBGene00011014 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00016067 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010742 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00016706 Caenorhabditis elegans From_analysis: Panther
      WBGene00021415 Caenorhabditis elegans From_analysis: Panther
    Structured_description (2)
  Molecular_info: Corresponding_CDS: C01C10.1a
      C01C10.1b
    Corresponding_transcript: C01C10.1a.1
      C01C10.1b.1
    Other_sequence: NAC00990_1
      BU666339.1
      Dviv_isotig23650
      GR12997
      GRC02095_1
      CBC17674_1
    Associated_feature: WBsf655190
      WBsf662966
      WBsf1005831
      WBsf1005832
      WBsf1005833
      WBsf1023243
      WBsf235933
  Experimental_info: RNAi_result: WBRNAi00009908 Inferred_automatically: RNAi_primary
      WBRNAi00088425 Inferred_automatically: RNAi_primary
      WBRNAi00077666 Inferred_automatically: RNAi_primary
      WBRNAi00077665 Inferred_automatically: RNAi_primary
      WBRNAi00039290 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1207
      Expr1208
      Expr2560
      Expr1014543
      Expr1030312
      Expr1143408
      Expr2010042
      Expr2028283
    Drives_construct: WBCnstr00010853
      WBCnstr00037476
    Construct_product: WBCnstr00010853
      WBCnstr00037476
    Antibody: WBAntibody00000650
    Microarray_results (20)
    Expression_cluster (131)
    Interaction: WBInteraction000126407
      WBInteraction000126827
      WBInteraction000140913
      WBInteraction000140914
      WBInteraction000147230
      WBInteraction000190786
  Map_info (4)
  Reference: WBPaper00005946
    WBPaper00018356
    WBPaper00039831
    WBPaper00043459
    WBPaper00044402
    WBPaper00044723
  Remark: Sequence connection from [Asano A, Tsukita S]
    Name exchange requested by Dr. Asano: clc-2 = C01C10.1 and clc-4 = T05A10.2 Person_evidence: WBPerson765
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene