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WormBase Tree Display for Gene: WBGene00000002

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Name Class

WBGene00000002EvidenceAuthor_evidenceVeljkovic E
Verrey F
SMapS_parentSequenceF27C8
IdentityVersion1
NameCGC_nameaat-1
Sequence_nameF27C8.1
Molecular_nameF27C8.1
F27C8.1.1
CE03266
Other_nameCELE_F27C8.1Accession_evidenceNDBBX284604
Public_nameaat-1
DB_infoDatabaseAceViewgene4K364
WormQTLgeneWBGene00000002
WormFluxgeneWBGene00000002
NDBlocus_tagCELE_F27C8.1
PanthergeneCAEEL|WormBase=WBGene00000002|UniProtKB=Q19834
familyPTHR11785
NCBIgene177793
RefSeqproteinNM_069306.7
TrEMBLUniProtAccQ19834
UniProt_GCRPUniProtAccQ19834
OMIMgene603593
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:19WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaat
Allele (38)
StrainWBStrain00054846
RNASeq_FPKM (74)
GO_annotation (11)
OrthologWBGene00072228Caenorhabditis remaneiFrom_analysis (4)
WBGene00039142Caenorhabditis briggsaeFrom_analysis (5)
WBGene00149684Caenorhabditis brenneriFrom_analysis (4)
WBGene00155266Caenorhabditis brenneriFrom_analysis (4)
WBGene00128643Caenorhabditis japonicaFrom_analysis (4)
WBGene00216201Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00110222Pristionchus pacificusFrom_analysis (2)
WBGene00223909Brugia malayiFrom_analysisWormBase-Compara
WBGene00269017Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8641Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7466Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19943Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21159Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8095Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7945Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14541Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g993Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13014Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24984Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25928Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22231Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_17799.g25802Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g13239Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8220Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00186.g6569Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11900Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013471Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05703Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13204Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40340700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11359Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242584Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00268061Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297255Trichuris murisFrom_analysisWormBase-Compara
WBGene00299376Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003287Saccharomyces cerevisiaeFrom_analysis (7)
SGD:S000001028Saccharomyces cerevisiaeFrom_analysis (7)
FB:FBgn0039844Drosophila melanogasterFrom_analysis (9)
ZFIN:ZDB-GENE-000607-21Danio rerioFrom_analysis (3)
ZFIN:ZDB-GENE-121105-2Danio rerioFrom_analysis (3)
ZFIN:ZDB-GENE-070705-534Danio rerioFrom_analysis (3)
ZFIN:ZDB-GENE-080116-1Danio rerioFrom_analysis (3)
ZFIN:ZDB-GENE-051127-5Danio rerioFrom_analysis (3)
ZFIN:ZDB-GENE-080818-4Danio rerioFrom_analysis (6)
ZFIN:ZDB-GENE-121120-2Danio rerioFrom_analysis (6)
ZFIN:ZDB-GENE-030616-586Danio rerioFrom_analysis (7)
HGNC:11063Homo sapiensFrom_analysis (6)
HGNC:11065Homo sapiensFrom_analysis (3)
HGNC:11064Homo sapiensFrom_analysis (3)
HGNC:11066Homo sapiensFrom_analysis (7)
HGNC:11058Homo sapiensFrom_analysis (3)
MGI:1298205Mus musculusFrom_analysis (6)
MGI:1337120Mus musculusFrom_analysis (3)
MGI:1347355Mus musculusFrom_analysis (3)
MGI:1355323Mus musculusFrom_analysis (7)
MGI:1858261Mus musculusFrom_analysis (3)
MGI:2142598Mus musculusFrom_analysis (5)
RGD:620639Rattus norvegicusFrom_analysis (6)
RGD:619902Rattus norvegicusFrom_analysis (3)
RGD:619904Rattus norvegicusFrom_analysis (7)
RGD:621672Rattus norvegicusFrom_analysis (3)
RGD:1309193Rattus norvegicusFrom_analysis (5)
Paralog (12)
Structured_description (2)
Disease_infoPotential_model (26)
Molecular_infoCorresponding_CDSF27C8.1
Corresponding_transcriptF27C8.1.1
Other_sequence (63)
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00087502Inferred_automaticallyRNAi_primary
WBRNAi00045732Inferred_automaticallyRNAi_primary
WBRNAi00031488Inferred_automaticallyRNAi_primary
WBRNAi00113611Inferred_automaticallyRNAi_primary
WBRNAi00013991Inferred_automaticallyRNAi_primary
WBRNAi00112392Inferred_automaticallyRNAi_primary
Expr_patternChronogram1135
Expr5887
Expr15194
Expr1023109
Expr1030001
Expr1149639
Expr2009064
Expr2027300
Drives_constructWBCnstr00003611
WBCnstr00037804
WBCnstr00042037
Construct_productWBCnstr00037804
WBCnstr00042037
AntibodyWBAntibody00000717
Microarray_results (18)
Expression_cluster (209)
Interaction (13)
Map_infoMapIVPosition4.33112Error0.001998
PositivePositive_cloneF27C8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00006408
WBPaper00024381
WBPaper00035475
WBPaper00038491
WBPaper00042390
WBPaper00045095
WBPaper00050950
WBPaper00053894
WBPaper00055090
WBPaper00060013
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene