WormBase Tree Display for Gene: WBGene00012715
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| WBGene00012715 | SMap | S_parent | Sequence | Y39E4B | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | snpc | |||||
| Allele (50) | ||||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation | 00099345 | |||||
| 00099346 | ||||||
| 00099347 | ||||||
| 00099348 | ||||||
| Ortholog (30) | ||||||
| Paralog | WBGene00015513 | Caenorhabditis elegans | From_analysis | Panther | ||
| WormBase-Compara | ||||||
| WBGene00019894 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Panther | ||||||
| WormBase-Compara | ||||||
| WBGene00017265 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Panther | ||||||
| WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable sequence-specific DNA binding activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Predicted to be part of snRNA-activating protein complex. Is an ortholog of human SNAPC1 (small nuclear RNA activating complex polypeptide 1). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Y39E4B.2 | ||||
| Corresponding_transcript | Y39E4B.2.1 | |||||
| Other_sequence | CBC07405_1 | |||||
| MC00813 | ||||||
| CR01551 | ||||||
| MC01226 | ||||||
| CRC03671_1 | ||||||
| Associated_feature | WBsf651567 | |||||
| WBsf666497 | ||||||
| WBsf667567 | ||||||
| WBsf978911 | ||||||
| WBsf994821 | ||||||
| WBsf227720 | ||||||
| WBsf227721 | ||||||
| Transcription_factor | WBTranscriptionFactor001093 | |||||
| Experimental_info | RNAi_result | WBRNAi00056241 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00056244 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00113562 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00036945 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1027728 | |||||
| Expr1035625 | ||||||
| Expr1159728 | ||||||
| Expr2015957 | ||||||
| Expr2034192 | ||||||
| Drives_construct | WBCnstr00029862 | |||||
| Construct_product | WBCnstr00029862 | |||||
| Microarray_results | 180246_s_at | |||||
| A_12_P103173 | ||||||
| Aff_Y39E4B.K | ||||||
| GPL13394_WBGene00012715 | ||||||
| GPL13914_Y39E4B.2 | ||||||
| GPL14144_Y39E4B.2_320-379_0.900_26_B | ||||||
| GPL14144_Y39E4B.2_522-581_0.894_30_C | ||||||
| GPL14144_Y39E4B.2_584-643_0.913_13_A | ||||||
| GPL19516_CGZ0044937 | ||||||
| GPL21109_Y39E4B.2 | ||||||
| GPL3518_CE21714 | ||||||
| GPL8304_CE_WBGene00012715_A | ||||||
| GPL8304_CE_WBGene00012715_C | ||||||
| GPL8673_Y39E4B_2P00209 | ||||||
| GPL8673_Y39E4B_2P00460 | ||||||
| GPL8673_Y39E4B_2P00845 | ||||||
| GPL9450_Y39E4B.2 | ||||||
| cea2.p.76757 | ||||||
| Expression_cluster (151) | ||||||
| Interaction (11) | ||||||
| Map_info (3) | ||||||
| Reference | WBPaper00055090 | |||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
