WormBase Tree Display for Gene: WBGene00015513

WBGene00015513 SMap: S_parent: Sequence: C06A8
  Identity: Version: 2
    Name: CGC_name: snpc-1.1 Person_evidence: WBPerson2290
      Sequence_name: C06A8.2
      Molecular_name: C06A8.2
        C06A8.2.1
        CE31292
      Other_name: CELE_C06A8.2 Accession_evidence: NDB BX284602
      Public_name: snpc-1.1
    DB_info: Database: AceView gene 2I70
        WormQTL gene WBGene00015513
        WormFlux gene WBGene00015513
        NDB locus_tag CELE_C06A8.2
        Panther gene CAEEL|WormBase=WBGene00015513|UniProtKB=Q17694
          family PTHR15131
        NCBI gene 174255
        RefSeq protein NM_063235.6
        TREEFAM TREEFAM_ID TF324445
        TrEMBL UniProtAcc Q17694
        UniProt_GCRP UniProtAcc Q17694
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Jul 2013 14:01:25 WBPerson2970 Name_change: CGC_name: snpc-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: snpc
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00058927
      00058928
      00058929
      00058930
    Contained_in_operon: CEOP2731
    Ortholog (29)
    Paralog: WBGene00012715 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019894 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017265 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable sequence-specific DNA binding activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Predicted to be part of snRNA-activating protein complex. Is an ortholog of human SNAPC1 (small nuclear RNA activating complex polypeptide 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C06A8.2
    Corresponding_CDS_history: C06A8.2:wp81
    Corresponding_transcript: C06A8.2.1
    Other_sequence: CBC10958_1
      CBC10772_1
      CBC07621_1
    Associated_feature: WBsf650272
      WBsf665733
      WBsf223398
  Experimental_info: RNAi_result: WBRNAi00008350 Inferred_automatically: RNAi_primary
      WBRNAi00113059 Inferred_automatically: RNAi_primary
      WBRNAi00113288 Inferred_automatically: RNAi_primary
      WBRNAi00039834 Inferred_automatically: RNAi_primary
      WBRNAi00091002 Inferred_automatically: RNAi_primary
      WBRNAi00024483 Inferred_automatically: RNAi_primary
      WBRNAi00072901 Inferred_automatically: RNAi_primary
      WBRNAi00113561 Inferred_automatically: RNAi_primary
      WBRNAi00028543 Inferred_automatically: RNAi_primary
      WBRNAi00072902 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015169
      Expr1036640
      Expr1143915
      Expr2015956
      Expr2034191
    Drives_construct: WBCnstr00028789
    Construct_product: WBCnstr00028789
    Microarray_results (19)
    Expression_cluster (108)
    Interaction (83)
  Map_info: Map: II Position: 0.562664
    Positive: Positive_clone: C06A8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00062604
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene