WormBase Tree Display for Gene: WBGene00009319
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WBGene00009319 | SMap | S_parent | Sequence | F32B6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | mccc-1 | Person_evidence | WBPerson1997 | |||
Sequence_name | F32B6.2 | ||||||
Molecular_name | F32B6.2 | ||||||
F32B6.2.1 | |||||||
CE35517 | |||||||
Other_name | CELE_F32B6.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | mccc-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mccc | ||||||
Allele (40) | |||||||
Strain | WBStrain00003137 | ||||||
WBStrain00054654 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00034488 | ||||||
00034489 | |||||||
00034490 | |||||||
00034491 | |||||||
00034492 | |||||||
00034493 | |||||||
00034494 | |||||||
00117040 | |||||||
Ortholog (47) | |||||||
Paralog | WBGene00017864 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00004076 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00012131 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | mccc-1 encodes an ortholog of the human gene ALPHA METHYLCROTONOYL-COENZYME A CARBOXYLASE 1 (MCCC1; 3-MCC), which when mutated leads to beta-methylcrotonyl-glycinuria (OMIM:210200). | Paper_evidence | WBPaper00004637 | |||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson1823 | |||||||
WBPerson567 | |||||||
Date_last_updated | 26 Jun 2012 00:00:00 | ||||||
Automated_description | Predicted to enable ATP binding activity and ligase activity. Predicted to contribute to methylcrotonoyl-CoA carboxylase activity. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in 3-Methylcrotonyl-CoA carboxylase 1 deficiency. Is an ortholog of human MCCC1 (methylcrotonyl-CoA carboxylase subunit 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080579 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6936) | ||
Molecular_info | Corresponding_CDS | F32B6.2 | |||||
Corresponding_CDS_history | F32B6.2:wp109 | ||||||
Corresponding_transcript | F32B6.2.1 | ||||||
Other_sequence (50) | |||||||
Associated_feature | WBsf646261 | ||||||
WBsf228897 | |||||||
Experimental_info | RNAi_result | WBRNAi00031663 | Inferred_automatically | RNAi_primary | |||
WBRNAi00046113 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00106992 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014204 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00106969 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1957 | ||||||
Expr5931 | |||||||
Expr1013969 | |||||||
Expr1034073 | |||||||
Expr1149996 | |||||||
Expr2013445 | |||||||
Expr2031679 | |||||||
Drives_construct | WBCnstr00003620 | ||||||
WBCnstr00032290 | |||||||
Construct_product | WBCnstr00032290 | ||||||
Microarray_results | SMD_F32B6.2 | ||||||
SMD_F32B6.2:2 | |||||||
192078_at | |||||||
A_12_P111562 | |||||||
A_12_P160779 | |||||||
A_12_P160780 | |||||||
Aff_F32B6.2 | |||||||
GPL13394_WBGene00009319 | |||||||
GPL13914_F32B6.2 | |||||||
GPL14144_F32B6.2_1049-1108_0.890_41_A | |||||||
GPL14144_F32B6.2_909-968_0.863_63_C | |||||||
GPL14144_F32B6.2_977-1036_0.869_57_B | |||||||
GPL19516_CGZ0019286 | |||||||
GPL21109_F32B6.2 | |||||||
GPL3518_CE09857 | |||||||
GPL8304_CE_WBGene00009319_A | |||||||
GPL8304_CE_WBGene00009319_B | |||||||
GPL8304_CE_WBGene00009319_C | |||||||
GPL8673_F32B6_2P01047 | |||||||
GPL8673_F32B6_2P01091 | |||||||
GPL8673_F32B6_2P01846 | |||||||
GPL9450_F32B6.2 | |||||||
cea2.p.91584 | |||||||
Expression_cluster (141) | |||||||
Interaction (178) | |||||||
Map_info | Map | IV | Position | 4.43716 | |||
Positive | Positive_clone | F32B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00042204 | |||||||
WBPaper00045076 | |||||||
WBPaper00055090 | |||||||
WBPaper00061818 | |||||||
WBPaper00062388 | |||||||
WBPaper00064323 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |