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WormBase Tree Display for Gene: WBGene00006926

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Name Class

WBGene00006926SMapS_parentSequenceC42D8
IdentityVersion1
NameCGC_namevit-2Person_evidenceWBPerson71
Sequence_nameC42D8.2
Molecular_nameC42D8.2
C42D8.2.1
CE06950
Other_nameCELE_C42D8.2Accession_evidenceNDBBX284606
Public_namevit-2
DB_infoDatabaseWormQTLgeneWBGene00006926
WormFluxgeneWBGene00006926
NDBlocus_tagCELE_C42D8.2
PanthergeneCAEEL|WormBase=WBGene00006926|UniProtKB=P05690
familyPTHR23345
NCBIgene180781
RefSeqproteinNM_076467.7
SwissProtUniProtAccP05690
UniProt_GCRPUniProtAccP05690
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvit
Allele (95)
Legacy_informationStructural gene for vitellogenin yp170B.
[C.elegansII] NMK. 4.9 kb transcript, specific to adult hermaphrodite intestine, encodes vitellogenin yp170B (67% identity to VIT-5). Extensive promoter analysis. [Speith et al. 1985b; MacMorris et al. 1994; BL]
Strain (11)
RNASeq_FPKM (74)
GO_annotation00038891
00038892
00038893
00038894
00038895
00038896
00038897
00038898
00115036
00115037
Ortholog (64)
ParalogWBGene00006925Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00006927Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006928Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006929Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006930Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionvit-2 encodes the vitellogenin homolog YP170; vit-2 is expressed in the adult hermaphrodite intestine and VIT-2 is secreted into the pseudocoelomic space before being taken up by developing oocytes; vit-2 expression is regulated in a sex-, stage-, and tissue-specific manner by the ELT-2/GATA and MAB-3 transcription factors.Paper_evidenceWBPaper00003831
WBPaper00004538
WBPaper00032471
WBPaper00001864
WBPaper00003452
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated24 Mar 2014 00:00:00
Automated_descriptionPredicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Located in cytoplasmic vesicle; vesicle lumen; and yolk granule. Expressed in embryonic cell; gonad; intestine; oocyte; and pseudocoelom.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC42D8.2
Corresponding_CDS_history (2)
Corresponding_transcriptC42D8.2.1
Other_sequence (264)
Associated_feature (19)
Experimental_infoRNAi_resultWBRNAi00095269Inferred_automaticallyRNAi_primary
WBRNAi00042364Inferred_automaticallyRNAi_primary
WBRNAi00095273Inferred_automaticallyRNAi_primary
WBRNAi00063230Inferred_automaticallyRNAi_primary
WBRNAi00001993Inferred_automaticallyRNAi_primary
WBRNAi00063231Inferred_automaticallyRNAi_primary
Expr_patternExpr520
Expr11396
Expr12138
Expr12674
Expr16161
Expr1015447
Expr1032943
Expr1146349
Expr2018001
Expr2036137
Drives_construct (19)
Construct_productWBCnstr00000145
WBCnstr00012417
WBCnstr00018820
WBCnstr00021273
WBCnstr00022596
WBCnstr00034094
WBCnstr00041719
Regulate_expr_clusterWBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051305:vit-2(ac3)_upregulated
AntibodyWBAntibody00000018
Microarray_results (21)
Expression_cluster (320)
InteractionWBInteraction000003228
WBInteraction000005589
WBInteraction000005616
WBInteraction000030977
WBInteraction000031152
WBInteraction000031164
WBInteraction000031573
WBInteraction000052976
WBInteraction000102658
WBInteraction000103812
WBInteraction000103956
WBInteraction000107131
WBInteraction000109636
WBInteraction000111268
WBInteraction000112509
WBInteraction000114862
WBInteraction000116083
WBInteraction000117532
WBInteraction000117570
WBInteraction000117744
WBInteraction000120062
WBInteraction000121339
WBInteraction000123004
WBInteraction000123005
WBInteraction000124374
WBInteraction000134852
WBInteraction000135100
WBInteraction000138612
WBInteraction000138922
WBInteraction000140541
WBInteraction000142496
WBInteraction000143036
WBInteraction000143954
WBInteraction000144203
WBInteraction000144560
WBInteraction000144821
WBInteraction000145223
WBInteraction000145335
WBInteraction000145336
WBInteraction000145337
WBInteraction000145338
WBInteraction000145546
WBInteraction000147093
WBInteraction000149147
WBInteraction000149417
WBInteraction000150507
WBInteraction000150845
WBInteraction000152465
WBInteraction000156927
WBInteraction000160392
WBInteraction000160393
WBInteraction000162104
WBInteraction000162578
WBInteraction000162579
WBInteraction000163706
WBInteraction000163819
WBInteraction000164115
WBInteraction000164573
WBInteraction000165055
WBInteraction000166453
WBInteraction000167271
WBInteraction000167679
WBInteraction000167680
WBInteraction000167681
WBInteraction000167682
WBInteraction000167683
WBInteraction000168009
WBInteraction000169793
WBInteraction000170250
WBInteraction000170825
WBInteraction000171797
WBInteraction000171898
WBInteraction000174035
WBInteraction000174036
WBInteraction000174885
WBInteraction000175497
WBInteraction000175499
WBInteraction000175505
WBInteraction000175509
WBInteraction000175510
WBInteraction000175511
WBInteraction000175512
WBInteraction000175513
WBInteraction000175514
WBInteraction000177559
WBInteraction000180146
WBInteraction000182494
WBInteraction000182900
WBInteraction000183680
WBInteraction000187514
WBInteraction000189781
WBInteraction000192298
WBInteraction000194100
WBInteraction000196343
WBInteraction000196787
WBInteraction000197371
WBInteraction000197616
WBInteraction000198722
WBInteraction000199179
WBInteraction000199632
WBInteraction000200023
WBInteraction000201115
WBInteraction000202540
WBInteraction000204992
WBInteraction000205217
WBInteraction000207837
WBInteraction000208680
WBInteraction000208750
WBInteraction000211412
WBInteraction000211719
WBInteraction000212388
WBInteraction000212937
WBInteraction000215787
WBInteraction000215871
WBInteraction000216106
WBInteraction000216227
WBInteraction000218379
WBInteraction000219457
WBInteraction000224522
WBInteraction000227503
WBInteraction000227712
WBInteraction000230181
WBInteraction000231477
WBInteraction000231823
WBInteraction000232706
WBInteraction000237711
WBInteraction000237977
WBInteraction000238569
WBInteraction000242757
WBInteraction000244438
WBInteraction000247625
WBInteraction000248038
WBInteraction000249372
WBInteraction000250401
WBInteraction000252108
WBInteraction000252296
WBInteraction000255912
WBInteraction000259657
WBInteraction000259658
WBInteraction000261395
WBInteraction000261422
WBInteraction000261877
WBInteraction000262928
WBInteraction000265839
WBInteraction000266151
WBInteraction000266863
WBInteraction000266877
WBInteraction000267554
WBInteraction000269392
WBInteraction000269880
WBInteraction000271586
WBInteraction000274272
WBInteraction000274755
WBInteraction000279119
WBInteraction000280769
WBInteraction000281558
WBInteraction000281852
WBInteraction000283522
WBInteraction000284104
WBInteraction000287248
WBInteraction000288787
WBInteraction000289065
WBInteraction000290042
WBInteraction000290325
WBInteraction000291622
WBInteraction000294494
WBInteraction000296665
WBInteraction000297036
WBInteraction000297712
WBInteraction000299004
WBInteraction000302142
WBInteraction000302310
WBInteraction000302321
WBInteraction000305731
WBInteraction000310186
WBInteraction000311789
WBInteraction000316078
WBInteraction000317244
WBInteraction000320823
WBInteraction000321243
WBInteraction000324724
WBInteraction000328525
WBInteraction000329164
WBInteraction000329974
WBInteraction000330175
WBInteraction000332017
WBInteraction000332028
WBInteraction000335378
WBInteraction000338085
WBInteraction000339521
WBInteraction000340643
WBInteraction000341879
WBInteraction000345681
WBInteraction000353073
WBInteraction000356605
WBInteraction000358251
WBInteraction000366881
WBInteraction000367359
WBInteraction000367530
WBInteraction000367935
WBInteraction000371526
WBInteraction000371678
WBInteraction000372952
WBInteraction000374884
WBInteraction000374967
WBInteraction000379951
WBInteraction000381097
WBInteraction000385294
WBInteraction000392327
WBInteraction000394871
WBInteraction000396299
WBInteraction000397253
WBInteraction000401845
WBInteraction000402015
WBInteraction000402607
WBInteraction000402735
WBInteraction000404033
WBInteraction000406631
WBInteraction000407036
WBInteraction000408076
WBInteraction000413542
WBInteraction000413814
WBInteraction000431893
WBInteraction000432990
WBInteraction000433260
WBInteraction000436788
WBInteraction000440655
WBInteraction000443413
WBInteraction000443580
WBInteraction000447321
WBInteraction000449038
WBInteraction000453002
WBInteraction000456023
WBInteraction000462658
WBInteraction000502669
WBInteraction000503386
WBInteraction000503482
WBInteraction000503828
WBInteraction000504383
WBInteraction000504528
WBInteraction000504971
WBInteraction000504972
WBInteraction000504974
WBInteraction000513366
WBInteraction000518670
WBInteraction000518812
WBInteraction000519794
WBInteraction000519969
WBInteraction000520117
WBInteraction000524801
WBInteraction000524887
WBInteraction000534889
WBInteraction000534890
WBInteraction000536510
WBInteraction000539598
WBInteraction000539628
WBInteraction000539651
WBInteraction000539711
WBInteraction000539714
WBInteraction000539715
WBInteraction000539723
WBInteraction000539743
WBInteraction000540505
WBInteraction000541638
WBInteraction000541639
WBInteraction000546197
WBInteraction000546326
WBInteraction000549762
WBInteraction000552725
WBInteraction000553810
WBInteraction000554594
WBInteraction000555329
WBInteraction000556049
WBInteraction000556173
WBInteraction000556174
WBInteraction000556175
WBInteraction000556214
WBInteraction000556885
WBInteraction000557013
WBInteraction000557014
WBInteraction000557015
WBInteraction000557016
WBInteraction000557061
WBInteraction000557065
WBInteraction000557703
WBInteraction000557704
WBInteraction000558179
WBInteraction000558180
WBInteraction000558181
WBInteraction000559978
WBInteraction000561735
WBInteraction000562229
WBInteraction000562483
WBInteraction000562647
WBInteraction000564477
WBInteraction000564712
WBInteraction000565397
WBInteraction000566048
WBInteraction000567306
WBInteraction000567336
WBInteraction000567774
WBInteraction000569224
WBInteraction000569494
WBInteraction000569495
WBInteraction000569504
WBInteraction000569505
WBInteraction000570597
WBInteraction000572132
WBInteraction000573965
WBInteraction000576146
WBInteraction000577815
WBInteraction000578355
WBInteraction000580504
WBInteraction000582005
WBInteraction000584600
WBInteraction000585154
WBInteraction000585888
Map_infoMapXPosition-6.18804Error0.002606
PositivePositive_cloneC42D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
U32
Pseudo_map_position
Reference (114)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene