Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00001427

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00001427SMapS_parentSequenceY18D10A
IdentityVersion1
NameCGC_namefkb-2Person_evidenceWBPerson466
Sequence_nameY18D10A.19
Molecular_nameY18D10A.19
Y18D10A.19.1
CE21417
Other_nameCELE_Y18D10A.19Accession_evidenceNDBBX284601
Public_namefkb-2
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfkb
Allele (15)
StrainWBStrain00032903
RNASeq_FPKM (74)
GO_annotation00099491
00099492
00099493
00099494
00099495
00099496
00099497
00108693
Contained_in_operonCEOP1903
OrthologWBGene00069703Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00027056Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00144362Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00093061Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00120484Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131209Caenorhabditis japonicaFrom_analysisTreeFam
CSP26.g3499Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10156Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21093Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14519Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2674Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7052Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g13492Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00062.g3061Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-fkb-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold503.g2360Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_06219.g36241Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15222Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003377Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03055Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_10042200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2614Caenorhabditis elegansFrom_analysisWormBase-Compara
SGD:S000005079Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0013954Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-030131-7275Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-040426-1785Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-040927-9Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
HGNC:3711Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
HGNC:3712Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
HGNC:21376Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
MGI:95541Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1336205Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
RGD:2617Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
RGD:61835Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
SonicParanoid
ParalogWBGene00001426Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001431Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001433Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001428Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001429Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001430Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001432Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionfkb-2 encodes a peptidylprolyl cis/trans isomerase homologous to the mammalian FK506 immunosuppressant-binding protein 1A (FKBP1A, OMIM:186945, mutations associated with myocardial noncompaction); by homology, FKB-2 could function in a number of processes including protein folding, signal transduction, and regulation of muscle contraction; however, the precise role of FKB-2 in C. elegans development and/or behavior is not yet known,.Paper_evidenceWBPaper00004285
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Graves' disease. Is an ortholog of human FKBP1A (FKBP prolyl isomerase 1A); FKBP1B (FKBP prolyl isomerase 1B); and FKBP1C (FKBP prolyl isomerase family member 1C).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:12361Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3712)
Molecular_infoCorresponding_CDSY18D10A.19
Corresponding_CDS_historyY18D10A.19a:wp118
Y18D10A.19b:wp118
Y18D10A.19c:wp118
Corresponding_transcriptY18D10A.19.1
Other_sequence (146)
Associated_featureWBsf976592
WBsf976593
WBsf976594
WBsf981120
WBsf985723
WBsf985724
WBsf985725
WBsf218655
Experimental_infoRNAi_resultWBRNAi00036695Inferred_automaticallyRNAi_primary
Expr_patternExpr16136
Expr1025484
Expr1030852
Expr1159118
Expr2011796
Expr2030034
Microarray_results (18)
Expression_cluster (150)
InteractionWBInteraction000039176
WBInteraction000039178
WBInteraction000047355
WBInteraction000047358
WBInteraction000048143
WBInteraction000049783
WBInteraction000049784
WBInteraction000049785
WBInteraction000103050
WBInteraction000106335
WBInteraction000114431
WBInteraction000123989
WBInteraction000136270
WBInteraction000142806
WBInteraction000143876
WBInteraction000158039
WBInteraction000161817
WBInteraction000163027
WBInteraction000163046
WBInteraction000183805
WBInteraction000184054
WBInteraction000184055
WBInteraction000189703
WBInteraction000200127
WBInteraction000202596
WBInteraction000205682
WBInteraction000215293
WBInteraction000215407
WBInteraction000215522
WBInteraction000242310
WBInteraction000249477
WBInteraction000253059
WBInteraction000255838
WBInteraction000257671
WBInteraction000257889
WBInteraction000264850
WBInteraction000278526
WBInteraction000301111
WBInteraction000301233
WBInteraction000304913
WBInteraction000305149
WBInteraction000306794
WBInteraction000311758
WBInteraction000312044
WBInteraction000312166
WBInteraction000312515
WBInteraction000313175
WBInteraction000314025
WBInteraction000317258
WBInteraction000322840
WBInteraction000330107
WBInteraction000330108
WBInteraction000334570
WBInteraction000338466
WBInteraction000341169
WBInteraction000347944
WBInteraction000348525
WBInteraction000361702
WBInteraction000367235
WBInteraction000369875
WBInteraction000370477
WBInteraction000379716
WBInteraction000385233
WBInteraction000387308
WBInteraction000394168
WBInteraction000395194
WBInteraction000402587
WBInteraction000406727
WBInteraction000410753
WBInteraction000410754
WBInteraction000410755
WBInteraction000414334
WBInteraction000419754
WBInteraction000421284
WBInteraction000423142
WBInteraction000426157
WBInteraction000427017
WBInteraction000440262
WBInteraction000451975
WBInteraction000452932
WBInteraction000455005
WBInteraction000455916
WBInteraction000461008
WBInteraction000463448
WBInteraction000464041
WBInteraction000464128
WBInteraction000464205
WBInteraction000464374
WBInteraction000464896
WBInteraction000465581
WBInteraction000466532
WBInteraction000468580
WBInteraction000469333
WBInteraction000470012
WBInteraction000470013
WBInteraction000470991
WBInteraction000471272
WBInteraction000472347
WBInteraction000473017
WBInteraction000473018
WBInteraction000474986
WBInteraction000475137
WBInteraction000475201
WBInteraction000554689
WBInteraction000557468
WBInteraction000560799
WBInteraction000562243
WBInteraction000572384
WBInteraction000572611
WBInteraction000573419
WBInteraction000574505
WBInteraction000577563
WBInteraction000579041
WBInteraction000579999
Map_infoMapIPosition14.2167Error0.004655
PositivePositive_cloneY18D10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00004285
WBPaper00026884
WBPaper00038491
WBPaper00055090
WBPaper00063935
WBPaper00064046
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene