Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00009319

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00009319SMapS_parentSequenceF32B6
IdentityVersion2
NameCGC_namemccc-1Person_evidenceWBPerson1997
Sequence_nameF32B6.2
Molecular_nameF32B6.2
F32B6.2.1
CE35517
Other_nameCELE_F32B6.2Accession_evidenceNDBBX284604
Public_namemccc-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
224 May 2012 16:25:35WBPerson2970Name_changeCGC_namemccc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmccc
Allele (40)
StrainWBStrain00003137
WBStrain00054654
RNASeq_FPKM (74)
GO_annotation00034488
00034489
00034490
00034491
00034492
00034493
00034494
00117040
Ortholog (47)
ParalogWBGene00017864Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004076Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004258Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012131Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionmccc-1 encodes an ortholog of the human gene ALPHA METHYLCROTONOYL-COENZYME A CARBOXYLASE 1 (MCCC1; 3-MCC), which when mutated leads to beta-methylcrotonyl-glycinuria (OMIM:210200).Paper_evidenceWBPaper00004637
Curator_confirmedWBPerson1843
WBPerson1823
WBPerson567
Date_last_updated26 Jun 2012 00:00:00
Automated_descriptionPredicted to enable ATP binding activity and ligase activity. Predicted to contribute to methylcrotonoyl-CoA carboxylase activity. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in 3-Methylcrotonyl-CoA carboxylase 1 deficiency. Is an ortholog of human MCCC1 (methylcrotonyl-CoA carboxylase subunit 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0080579Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6936)
Molecular_infoCorresponding_CDSF32B6.2
Corresponding_CDS_historyF32B6.2:wp109
Corresponding_transcriptF32B6.2.1
Other_sequence (50)
Associated_featureWBsf646261
WBsf228897
Experimental_infoRNAi_resultWBRNAi00031663Inferred_automaticallyRNAi_primary
WBRNAi00046113Inferred_automaticallyRNAi_primary
WBRNAi00106992Inferred_automaticallyRNAi_primary
WBRNAi00014204Inferred_automaticallyRNAi_primary
WBRNAi00106969Inferred_automaticallyRNAi_primary
Expr_patternChronogram1957
Expr5931
Expr1013969
Expr1034073
Expr1149996
Expr2013445
Expr2031679
Drives_constructWBCnstr00003620
WBCnstr00032290
Construct_productWBCnstr00032290
Microarray_resultsSMD_F32B6.2
SMD_F32B6.2:2
192078_at
A_12_P111562
A_12_P160779
A_12_P160780
Aff_F32B6.2
GPL13394_WBGene00009319
GPL13914_F32B6.2
GPL14144_F32B6.2_1049-1108_0.890_41_A
GPL14144_F32B6.2_909-968_0.863_63_C
GPL14144_F32B6.2_977-1036_0.869_57_B
GPL19516_CGZ0019286
GPL21109_F32B6.2
GPL3518_CE09857
GPL8304_CE_WBGene00009319_A
GPL8304_CE_WBGene00009319_B
GPL8304_CE_WBGene00009319_C
GPL8673_F32B6_2P01047
GPL8673_F32B6_2P01091
GPL8673_F32B6_2P01846
GPL9450_F32B6.2
cea2.p.91584
Expression_cluster (141)
InteractionWBInteraction000105805
WBInteraction000111298
WBInteraction000111810
WBInteraction000113391
WBInteraction000114456
WBInteraction000135351
WBInteraction000143431
WBInteraction000144754
WBInteraction000145738
WBInteraction000146305
WBInteraction000148383
WBInteraction000151267
WBInteraction000155481
WBInteraction000155856
WBInteraction000157099
WBInteraction000164682
WBInteraction000168666
WBInteraction000170719
WBInteraction000170841
WBInteraction000172730
WBInteraction000179459
WBInteraction000181087
WBInteraction000181870
WBInteraction000182607
WBInteraction000184891
WBInteraction000187281
WBInteraction000188564
WBInteraction000189734
WBInteraction000199196
WBInteraction000200576
WBInteraction000203222
WBInteraction000208269
WBInteraction000212464
WBInteraction000212611
WBInteraction000214422
WBInteraction000214494
WBInteraction000214920
WBInteraction000224600
WBInteraction000225237
WBInteraction000227046
WBInteraction000228519
WBInteraction000229115
WBInteraction000232000
WBInteraction000236373
WBInteraction000237442
WBInteraction000241588
WBInteraction000241734
WBInteraction000243081
WBInteraction000244366
WBInteraction000244592
WBInteraction000246497
WBInteraction000246810
WBInteraction000257054
WBInteraction000261576
WBInteraction000261983
WBInteraction000262431
WBInteraction000266147
WBInteraction000273406
WBInteraction000274109
WBInteraction000276975
WBInteraction000278128
WBInteraction000278558
WBInteraction000289158
WBInteraction000290817
WBInteraction000295630
WBInteraction000298069
WBInteraction000298418
WBInteraction000300118
WBInteraction000300204
WBInteraction000305555
WBInteraction000311984
WBInteraction000312797
WBInteraction000314876
WBInteraction000318253
WBInteraction000318524
WBInteraction000320540
WBInteraction000321841
WBInteraction000323321
WBInteraction000325613
WBInteraction000328905
WBInteraction000333702
WBInteraction000337548
WBInteraction000338436
WBInteraction000341644
WBInteraction000343084
WBInteraction000343709
WBInteraction000345658
WBInteraction000347162
WBInteraction000349463
WBInteraction000349740
WBInteraction000349902
WBInteraction000352114
WBInteraction000352231
WBInteraction000352540
WBInteraction000353082
WBInteraction000359960
WBInteraction000360396
WBInteraction000363098
WBInteraction000364067
WBInteraction000365430
WBInteraction000365497
WBInteraction000368276
WBInteraction000368502
WBInteraction000368632
WBInteraction000370674
WBInteraction000373278
WBInteraction000374579
WBInteraction000375615
WBInteraction000375620
WBInteraction000376281
WBInteraction000379261
WBInteraction000379298
WBInteraction000385835
WBInteraction000386917
WBInteraction000389934
WBInteraction000390911
WBInteraction000390988
WBInteraction000392568
WBInteraction000398334
WBInteraction000398487
WBInteraction000399729
WBInteraction000403424
WBInteraction000403548
WBInteraction000406058
WBInteraction000406192
WBInteraction000407065
WBInteraction000408886
WBInteraction000409443
WBInteraction000410846
WBInteraction000410905
WBInteraction000420236
WBInteraction000420447
WBInteraction000420474
WBInteraction000423609
WBInteraction000424381
WBInteraction000425371
WBInteraction000428385
WBInteraction000430608
WBInteraction000433643
WBInteraction000435634
WBInteraction000436112
WBInteraction000436633
WBInteraction000437761
WBInteraction000438365
WBInteraction000441131
WBInteraction000442486
WBInteraction000446645
WBInteraction000448002
WBInteraction000452641
WBInteraction000453634
WBInteraction000456050
WBInteraction000463758
WBInteraction000465900
WBInteraction000468784
WBInteraction000471274
WBInteraction000504292
WBInteraction000504296
WBInteraction000520017
WBInteraction000539068
WBInteraction000539535
WBInteraction000540214
WBInteraction000540217
WBInteraction000552953
WBInteraction000554298
WBInteraction000555136
WBInteraction000559247
WBInteraction000562902
WBInteraction000564041
WBInteraction000566142
WBInteraction000568722
WBInteraction000572030
WBInteraction000573670
WBInteraction000574432
WBInteraction000576111
WBInteraction000577880
WBInteraction000579760
WBInteraction000583220
WBInteraction000585737
Map_infoMapIVPosition4.43716
PositivePositive_cloneF32B6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042204
WBPaper00045076
WBPaper00055090
WBPaper00061818
WBPaper00062388
WBPaper00064323
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene