WormBase Tree Display for Gene: WBGene00000533
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| WBGene00000533 | SMap | S_parent | Sequence | R07B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clh-6 | |||||||
| Sequence_name | R07B7.1 | ||||||||
| Molecular_name | R07B7.1 | ||||||||
| R07B7.1.1 | |||||||||
| CE29336 | |||||||||
| Other_name | cup-12 | Paper_evidence | WBPaper00050677 | ||||||
| CELE_R07B7.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | clh-6 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 17 Feb 2017 10:31:31 | WBPerson2970 | Name_change | Other_name | cup-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clh | ||||||||
| Allele (47) | |||||||||
| Possibly_affected_by | WBVar02158824 | ||||||||
| Strain | WBStrain00031632 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP5320 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000532 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00000528 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000529 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000530 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000531 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable chloride transmembrane transporter activity. Involved in lysosomal protein catabolic process. Predicted to be located in lysosomal membrane. Expressed in several structures, including body wall musculature; head; intestine; non-striated muscle; and tail. Human ortholog(s) of this gene implicated in autosomal dominant osteopetrosis 2 and autosomal recessive osteopetrosis 4. Is an ortholog of human CLCN7 (chloride voltage-gated channel 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110938 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2025) | ||||
| DOID:0110944 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2025) | ||||||
| Molecular_info | Corresponding_CDS | R07B7.1 | |||||||
| Corresponding_CDS_history | R07B7.1:wp63 | ||||||||
| Corresponding_transcript | R07B7.1.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf234613 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051426 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00077550 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr829 | ||||||||
| Expr830 | |||||||||
| Expr1127 | |||||||||
| Expr6473 | |||||||||
| Expr16466 | |||||||||
| Expr1013700 | |||||||||
| Expr1030319 | |||||||||
| Expr1155115 | |||||||||
| Expr2010233 | |||||||||
| Expr2028475 | |||||||||
| Drives_construct | WBCnstr00002568 | ||||||||
| WBCnstr00010095 | |||||||||
| WBCnstr00013238 | |||||||||
| WBCnstr00013247 | |||||||||
| WBCnstr00037467 | |||||||||
| WBCnstr00043044 | |||||||||
| Construct_product | WBCnstr00013247 | ||||||||
| WBCnstr00037467 | |||||||||
| WBCnstr00043044 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (84) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | V | Position | 3.6217 | Error | 0.001257 | |||
| Positive | Positive_clone | R07B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point (2) | ||||||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | sequence connection from [George AL] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
