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WormBase Tree Display for Gene: WBGene00015854

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Name Class

WBGene00015854SMapS_parentSequenceC16C8
IdentityVersion2
NameSequence_nameC16C8.17
Molecular_nameC16C8.17
C16C8.17.1
CE53891
Other_nameCELE_C16C8.17Accession_evidenceNDBBX284602
Public_nameC16C8.17
DB_infoDatabaseAceViewgene2D733
WormQTLgeneWBGene00015854
WormFluxgeneWBGene00015854
NDBlocus_tagCELE_C16C8.17
NCBIgene43578468
RefSeqproteinNM_001377758.1
TREEFAMTREEFAM_IDTF342747
TrEMBLUniProtAccP91058
UniProt_GCRPUniProtAccP91058
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
221 Oct 2019 15:06:23WBPerson4025EventSplit_intoWBGene00305093
Split_intoWBGene00305093
StatusLive
Gene_infoBiotypeSO:0001217
Allele (23)
RNASeq_FPKM (74)
OrthologWBGene00053058Caenorhabditis remaneiFrom_analysisTreeFam
chrII_pilon.g3979Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00008826Caenorhabditis elegansFrom_analysisTreeFam
WBGene00009360
WBGene00011921Caenorhabditis elegansFrom_analysisTreeFam
WBGene00018822Caenorhabditis elegansFrom_analysisTreeFam
WBGene00044538Caenorhabditis elegansFrom_analysisTreeFam
WBGene00044162Caenorhabditis elegansFrom_analysisTreeFam
WBGene00016770Caenorhabditis elegansFrom_analysisTreeFam
WBGene00077624Caenorhabditis elegansFrom_analysisTreeFam
WBGene00305093Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in ABaraapapp; ABaraapppp; germ line; male-specific anatomical entity; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; sir-2.1; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including allantoin; Psoralens; and metformin based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC16C8.17
Corresponding_CDS_historyC16C8.17:wp274
Corresponding_transcriptC16C8.17.1
Associated_featureWBsf987256
WBsf1011901
WBsf1011902
WBsf221011
Experimental_infoRNAi_resultWBRNAi00112575Inferred_automaticallyRNAi_primary
Expr_patternExpr1010799
Expr1144758
Expr2000865
Expr2019082
Drives_constructWBCnstr00028513
Construct_productWBCnstr00028513
Microarray_resultsSMD_C16C8.17
SMD_C16C8.17:2
GPL19516_CGZ0004923
GPL21109_C16C8.17
GPL8673_C16C8_17P00086
Expression_clusterWBPaper00032528:L3_depleted
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00044760:germline_specific
WBPaper00045774:clk-1_upregulated
WBPaper00049177:rpn-10(ok1865)_upregulated
WBPaper00050231:male_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053599:female_vs_male_downregulated
WBPaper00053888:drh-3(rrr2)_downregulated
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00055354:Allantoin_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055648:male-seminal-vesicle_expressed
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056284:ints-5(RNAi)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
WBPaper00059490:dcr-1(m9375)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060921:tbh-1(ok1196)_downregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061340:Neuroblast_M2_M3
WBPaper00061341:28C_48h_upregulated
WBPaper00061527:176662_at-Y53F4B.16
WBPaper00061527:sre-33-ZK1025.1_8337
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00065225:nhr-42(tm1375)_upregulated_uninfected
WBPaper00065581:hpk-1(pk1393)_downregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_14
WBPaper00005124:progesterone_10-7M_regulated
WBPaper00026629:L4_male_enriched
WBPaper00026929:sir-2.1_overexpression_regulated
[cgc6390]:mixed_spermatogenesis-somatic
InteractionWBInteraction000151223
WBInteraction000301634
WBInteraction000399653
WBInteraction000429753
WBInteraction000434795
Map_infoPositivePositive_cloneC16C8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-6.30323
MethodGene